Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ATP5F1P3-201ENST00000397213 657 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 RPL23AP48-201ENST00000406913 488 ntBASIC4.17□□□□□ -1.74
LDLRP01130 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 MTCO1P3-201ENST00000429327 192 ntBASIC4.17□□□□□ -1.74
LDLRP01130 RPS29P17-201ENST00000430795 166 ntBASIC4.17□□□□□ -1.74
LDLRP01130 RPL37P1-201ENST00000432310 284 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 AC096638.2-201ENST00000434965 711 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 KATNBL1P3-201ENST00000443475 909 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.17□□□□□ -1.74
LDLRP01130 PTENP1-201ENST00000447117 1215 ntBASIC4.17□□□□□ -1.74
LDLRP01130 HMGB1P16-201ENST00000447155 540 ntBASIC4.17□□□□□ -1.74
LDLRP01130 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.17□□□□□ -1.74
LDLRP01130 RPL23AP15-201ENST00000450202 459 ntBASIC4.17□□□□□ -1.74
LDLRP01130 ABCF2P2-201ENST00000450549 296 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.17□□□□□ -1.74
LDLRP01130 FGF7P3-201ENST00000454645 303 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC133473.1-201ENST00000455173 299 ntBASIC4.17□□□□□ -1.74
LDLRP01130 SCARNA10-201ENST00000459255 330 ntBASIC4.17□□□□□ -1.74
LDLRP01130 RPS6P4-201ENST00000494693 758 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.17□□□□□ -1.74
LDLRP01130 AC113347.3-201ENST00000509113 148 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC118465.1-201ENST00000513820 1271 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC4.17□□□□□ -1.74
LDLRP01130 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 AF279873.1-201ENST00000523393 313 ntBASIC4.17□□□□□ -1.74
LDLRP01130 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.17□□□□□ -1.74
LDLRP01130 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 OR4C2P-201ENST00000530855 1064 ntBASIC4.17□□□□□ -1.74
LDLRP01130 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.17□□□□□ -1.74
LDLRP01130 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.17□□□□□ -1.74
LDLRP01130 AC105129.1-201ENST00000560250 297 ntBASIC4.17□□□□□ -1.74
LDLRP01130 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 AP005136.1-201ENST00000579765 429 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.17□□□□□ -1.74
LDLRP01130 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.17□□□□□ -1.74
LDLRP01130 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 AC022916.3-201ENST00000592961 742 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC016877.3-201ENST00000606778 504 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC008121.2-201ENST00000614647 523 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC123768.4-201ENST00000616244 701 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC233309.1-201ENST00000619522 751 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC026585.1-201ENST00000619582 524 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC091304.6-201ENST00000619761 202 ntBASIC4.17□□□□□ -1.74
LDLRP01130 MIR4727-201ENST00000622232 55 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AC078883.4-201ENST00000623218 367 ntBASIC4.17□□□□□ -1.74
LDLRP01130 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.17□□□□□ -1.74
LDLRP01130 AL049737.1-201ENST00000413920 1403 ntBASIC4.17□□□□□ -1.74
LDLRP01130 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 LINC00622-201ENST00000562811 1570 ntBASIC4.17□□□□□ -1.74
LDLRP01130 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LDLRP01130 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
LDLRP01130 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 ZNF137P-201ENST00000456718 1920 ntBASIC4.17□□□□□ -1.74
LDLRP01130 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LDLRP01130 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.17□□□□□ -1.74
LDLRP01130 AC006971.1-201ENST00000407916 4486 ntBASIC4.17□□□□□ -1.74
LDLRP01130 AL139811.1-201ENST00000424779 2299 ntBASIC4.16□□□□□ -1.74
LDLRP01130 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.16□□□□□ -1.74
LDLRP01130 SNORA70.4-201ENST00000365509 134 ntBASIC4.16□□□□□ -1.74
LDLRP01130 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LDLRP01130 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
LDLRP01130 SNORD116-1-201ENST00000384335 95 ntBASIC4.16□□□□□ -1.74
LDLRP01130 RNU1-13P-201ENST00000384499 162 ntBASIC4.16□□□□□ -1.74
LDLRP01130 MIR670-201ENST00000390142 98 ntBASIC4.16□□□□□ -1.74
LDLRP01130 SNORA40.2-201ENST00000390847 128 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC011933.1-201ENST00000413334 321 ntBASIC4.16□□□□□ -1.74
LDLRP01130 JKAMPP1-201ENST00000413804 919 ntBASIC4.16□□□□□ -1.74
LDLRP01130 RPL22P18-201ENST00000417197 377 ntBASIC4.16□□□□□ -1.74
LDLRP01130 RPL7AP25-201ENST00000423357 805 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC010099.3-201ENST00000423896 409 ntBASIC4.16□□□□□ -1.74
LDLRP01130 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.16□□□□□ -1.74
LDLRP01130 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.16□□□□□ -1.74
LDLRP01130 ATP5C1P1-201ENST00000441945 895 ntBASIC4.16□□□□□ -1.74
LDLRP01130 MTCO2P3-201ENST00000442543 421 ntBASIC4.16□□□□□ -1.74
LDLRP01130 RAB11AP1-201ENST00000442978 646 ntBASIC4.16□□□□□ -1.74
LDLRP01130 RPL7P59-201ENST00000447700 943 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC004022.1-201ENST00000447766 1066 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.16□□□□□ -1.74
LDLRP01130 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
LDLRP01130 USP9YP25-201ENST00000457708 443 ntBASIC4.16□□□□□ -1.74
LDLRP01130 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.16□□□□□ -1.74
LDLRP01130 AC116533.1-201ENST00000459748 321 ntBASIC4.16□□□□□ -1.74
LDLRP01130 AC104763.1-201ENST00000475274 360 ntBASIC4.16□□□□□ -1.74
LDLRP01130 GAPDHP39-201ENST00000481866 979 ntBASIC4.16□□□□□ -1.74
LDLRP01130 RN7SL810P-201ENST00000493031 276 ntBASIC4.16□□□□□ -1.74
LDLRP01130 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.16□□□□□ -1.74
LDLRP01130 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.16□□□□□ -1.74
LDLRP01130 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 291 ms