Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.93□□□□□ -1.78
CLPTM1O96005 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.93□□□□□ -1.78
CLPTM1O96005 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.93□□□□□ -1.78
CLPTM1O96005 RPL9P32-201ENST00000464118 620 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC006463.2-201ENST00000473326 348 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.93□□□□□ -1.78
CLPTM1O96005 AK3P4-201ENST00000504283 583 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 SNORA3.4-201ENST00000515969 96 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.93□□□□□ -1.78
CLPTM1O96005 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.93□□□□□ -1.78
CLPTM1O96005 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CLPTM1O96005 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.93□□□□□ -1.78
CLPTM1O96005 AC069061.3-201ENST00000582254 823 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
CLPTM1O96005 AC093765.1-201ENST00000603758 881 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC099676.1-201ENST00000608886 657 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC012531.5-201ENST00000611375 151 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC107075.1-201ENST00000613695 314 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AC105227.2-201ENST00000615075 605 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.93□□□□□ -1.78
CLPTM1O96005 AC009039.2-201ENST00000624524 529 ntBASIC3.93□□□□□ -1.78
CLPTM1O96005 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CLPTM1O96005 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLPTM1O96005 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLPTM1O96005 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
CLPTM1O96005 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLPTM1O96005 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLPTM1O96005 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.92□□□□□ -1.78
CLPTM1O96005 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLPTM1O96005 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLPTM1O96005 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CLPTM1O96005 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.92□□□□□ -1.78
CLPTM1O96005 Y_RNA.169-201ENST00000363745 96 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 RNA5SP167-201ENST00000365461 116 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CLPTM1O96005 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 RPS3AP23-201ENST00000401762 784 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 SFR1P1-201ENST00000403720 688 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 RNU2-6P-201ENST00000411404 190 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.92□□□□□ -1.78
CLPTM1O96005 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 RPS12P10-201ENST00000427031 377 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AC017083.1-201ENST00000428093 483 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 RPL23AP1-201ENST00000428990 471 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 MTCO1P3-201ENST00000429327 192 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 RPS24P8-201ENST00000431490 402 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 BMS1P19-201ENST00000433925 393 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC073143.1-201ENST00000436316 395 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 COX7BP2-201ENST00000437976 242 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC007327.1-201ENST00000447461 264 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC079776.3-201ENST00000450665 370 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC006511.1-201ENST00000470614 315 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AP001086.1-201ENST00000494882 321 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 NIPA2P2-201ENST00000496376 1083 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AC021146.1-201ENST00000511202 716 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 FABP5P12-201ENST00000515543 389 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AC008802.1-201ENST00000519121 791 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC068790.4-201ENST00000602474 263 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 AC097478.2-201ENST00000610572 514 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AL157770.1-201ENST00000623049 439 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 AC006065.6-201ENST00000625201 545 ntBASIC3.92□□□□□ -1.78
CLPTM1O96005 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CLPTM1O96005 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CLPTM1O96005 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
CLPTM1O96005 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLPTM1O96005 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLPTM1O96005 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CLPTM1O96005 TNPO1P3-201ENST00000436471 2662 ntBASIC3.91□□□□□ -1.78
CLPTM1O96005 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CLPTM1O96005 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CLPTM1O96005 OR52E6-202ENST00000379946 954 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms