Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RNF40O75150 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RNF40O75150 AC022031.1-201ENST00000585985 2593 ntBASIC7.02□□□□□ -1.29
RNF40O75150 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.02□□□□□ -1.29
RNF40O75150 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
RNF40O75150 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
RNF40O75150 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF40O75150 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.01□□□□□ -1.29
RNF40O75150 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.01□□□□□ -1.29
RNF40O75150 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF40O75150 RNU1-65P-201ENST00000363919 148 ntBASIC7.01□□□□□ -1.29
RNF40O75150 Y_RNA.234-201ENST00000364409 97 ntBASIC7.01□□□□□ -1.29
RNF40O75150 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF40O75150 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF40O75150 Z99755.1-201ENST00000414048 380 ntBASIC7.01□□□□□ -1.29
RNF40O75150 RPL7P46-201ENST00000425129 740 ntBASIC7.01□□□□□ -1.29
RNF40O75150 EIF1P2-201ENST00000428233 350 ntBASIC7.01□□□□□ -1.29
RNF40O75150 MRPS21P3-201ENST00000436696 262 ntBASIC7.01□□□□□ -1.29
RNF40O75150 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.01□□□□□ -1.29
RNF40O75150 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 RN7SL216P-201ENST00000471607 298 ntBASIC7.01□□□□□ -1.29
RNF40O75150 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.01□□□□□ -1.29
RNF40O75150 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
RNF40O75150 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 AC011853.1-201ENST00000518911 454 ntBASIC7.01□□□□□ -1.29
RNF40O75150 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 AP001858.2-201ENST00000536213 601 ntBASIC7.01□□□□□ -1.29
RNF40O75150 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.01□□□□□ -1.29
RNF40O75150 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC7.01□□□□□ -1.29
RNF40O75150 MIR3154-201ENST00000577829 84 ntBASIC7.01□□□□□ -1.29
RNF40O75150 MIR5188-201ENST00000583467 113 ntBASIC7.01□□□□□ -1.29
RNF40O75150 MIR5692C1-201ENST00000585309 91 ntBASIC7.01□□□□□ -1.29
RNF40O75150 AC012175.1-201ENST00000603755 531 ntBASIC7.01□□□□□ -1.29
RNF40O75150 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC7.01□□□□□ -1.29
RNF40O75150 AC091953.5-201ENST00000622919 233 ntBASIC7.01□□□□□ -1.29
RNF40O75150 AC091925.2-201ENST00000625059 256 ntBASIC7.01□□□□□ -1.29
RNF40O75150 U6.114-201ENST00000636407 96 ntBASIC7.01□□□□□ -1.29
RNF40O75150 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.01□□□□□ -1.29
RNF40O75150 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.01□□□□□ -1.29
RNF40O75150 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF40O75150 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF40O75150 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
RNF40O75150 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF40O75150 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
RNF40O75150 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF40O75150 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
RNF40O75150 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RNF40O75150 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF40O75150 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RNF40O75150 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF40O75150 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC7□□□□□ -1.29
RNF40O75150 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RNF40O75150 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7□□□□□ -1.29
RNF40O75150 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7□□□□□ -1.29
RNF40O75150 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC7□□□□□ -1.29
RNF40O75150 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7□□□□□ -1.29
RNF40O75150 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RNF40O75150 RNU6-61P-201ENST00000365528 109 ntBASIC7□□□□□ -1.29
RNF40O75150 RNU6-128P-201ENST00000383976 107 ntBASIC7□□□□□ -1.29
RNF40O75150 RNU6-1127P-201ENST00000384580 107 ntBASIC7□□□□□ -1.29
RNF40O75150 SNORD58.1-201ENST00000391313 66 ntBASIC7□□□□□ -1.29
RNF40O75150 AP000580.1-201ENST00000404439 358 ntBASIC7□□□□□ -1.29
RNF40O75150 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7□□□□□ -1.29
RNF40O75150 AC016027.5-201ENST00000427227 210 ntBASIC7□□□□□ -1.29
RNF40O75150 CYCSP24-201ENST00000445119 316 ntBASIC7□□□□□ -1.29
RNF40O75150 FCF1P4-201ENST00000448326 183 ntBASIC7□□□□□ -1.29
RNF40O75150 AC133473.1-201ENST00000455173 299 ntBASIC7□□□□□ -1.29
RNF40O75150 DYNLL1P5-201ENST00000467158 270 ntBASIC7□□□□□ -1.29
RNF40O75150 AC099340.1-201ENST00000475247 599 ntBASIC7□□□□□ -1.29
RNF40O75150 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7□□□□□ -1.29
RNF40O75150 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC7□□□□□ -1.29
RNF40O75150 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RNF40O75150 AC079600.1-201ENST00000550326 297 ntBASIC7□□□□□ -1.29
RNF40O75150 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7□□□□□ -1.29
RNF40O75150 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC7□□□□□ -1.29
RNF40O75150 AL031320.1-201ENST00000604177 357 ntBASIC7□□□□□ -1.29
RNF40O75150 AC025034.2-201ENST00000623264 286 ntBASIC7□□□□□ -1.29
RNF40O75150 AC073593.1-201ENST00000624500 411 ntBASIC7□□□□□ -1.29
RNF40O75150 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7□□□□□ -1.29
RNF40O75150 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7□□□□□ -1.29
RNF40O75150 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC7□□□□□ -1.29
RNF40O75150 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7□□□□□ -1.29
RNF40O75150 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
RNF40O75150 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
RNF40O75150 AL161901.1-201ENST00000624954 3425 ntBASIC7□□□□□ -1.29
RNF40O75150 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
RNF40O75150 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF40O75150 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF40O75150 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
RNF40O75150 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7□□□□□ -1.29
RNF40O75150 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7□□□□□ -1.29
RNF40O75150 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
RNF40O75150 AC006600.2-201ENST00000624834 2506 ntBASIC6.99□□□□□ -1.29
RNF40O75150 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
RNF40O75150 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms