Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 RNU1-85P-201ENST00000364127 164 ntBASIC3.31□□□□□ -1.88
CTNSO60931 RNA5SP235-201ENST00000365411 114 ntBASIC3.31□□□□□ -1.88
CTNSO60931 MIR218-2-201ENST00000385006 110 ntBASIC3.31□□□□□ -1.88
CTNSO60931 RN7SKP27-201ENST00000410684 333 ntBASIC3.31□□□□□ -1.88
CTNSO60931 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNSO60931 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
CTNSO60931 FO393419.3-201ENST00000428741 282 ntBASIC3.31□□□□□ -1.88
CTNSO60931 ARL4AP4-201ENST00000434170 518 ntBASIC3.31□□□□□ -1.88
CTNSO60931 AC073063.1-201ENST00000434352 607 ntBASIC3.31□□□□□ -1.88
CTNSO60931 AC092641.1-201ENST00000440229 772 ntBASIC3.31□□□□□ -1.88
CTNSO60931 RPL21P23-201ENST00000446654 460 ntBASIC3.31□□□□□ -1.88
CTNSO60931 AC239367.2-201ENST00000447309 705 ntBASIC3.31□□□□□ -1.88
CTNSO60931 PDSS1P2-201ENST00000449397 678 ntBASIC3.31□□□□□ -1.88
CTNSO60931 RBMY2UP-201ENST00000453474 324 ntBASIC3.31□□□□□ -1.88
CTNSO60931 U3.44-201ENST00000458938 192 ntBASIC3.31□□□□□ -1.88
CTNSO60931 RNU6-775P-201ENST00000459318 96 ntBASIC3.31□□□□□ -1.88
CTNSO60931 RPS3AP50-201ENST00000487064 803 ntBASIC3.31□□□□□ -1.88
CTNSO60931 OR9N1P-202ENST00000494289 481 ntBASIC3.31□□□□□ -1.88
CTNSO60931 AC006499.5-201ENST00000505037 514 ntBASIC3.31□□□□□ -1.88
CTNSO60931 AC110768.1-201ENST00000509222 400 ntBASIC3.31□□□□□ -1.88
CTNSO60931 HMGB1P23-201ENST00000518743 568 ntBASIC3.31□□□□□ -1.88
CTNSO60931 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.31□□□□□ -1.88
CTNSO60931 OR5AP1P-201ENST00000529730 940 ntBASIC3.31□□□□□ -1.88
CTNSO60931 PTP4A1P6-201ENST00000531034 478 ntBASIC3.31□□□□□ -1.88
CTNSO60931 OR5B10P-201ENST00000532869 642 ntBASIC3.31□□□□□ -1.88
CTNSO60931 NOP56P3-201ENST00000549457 385 ntBASIC3.31□□□□□ -1.88
CTNSO60931 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.31□□□□□ -1.88
CTNSO60931 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.31□□□□□ -1.88
CTNSO60931 AP003117.2-201ENST00000606010 545 ntBASIC3.31□□□□□ -1.88
CTNSO60931 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.31□□□□□ -1.88
CTNSO60931 AC008121.2-201ENST00000614647 523 ntBASIC3.31□□□□□ -1.88
CTNSO60931 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
CTNSO60931 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTNSO60931 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
CTNSO60931 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTNSO60931 AC068647.1-201ENST00000489539 2265 ntBASIC3.31□□□□□ -1.88
CTNSO60931 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNSO60931 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNSO60931 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTNSO60931 ZNF542P-204ENST00000482727 1305 ntBASIC3.3□□□□□ -1.88
CTNSO60931 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
CTNSO60931 MIR449B-201ENST00000384995 97 ntBASIC3.3□□□□□ -1.88
CTNSO60931 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
CTNSO60931 SNORA48.7-201ENST00000391302 135 ntBASIC3.3□□□□□ -1.88
CTNSO60931 HNRNPDP2-201ENST00000406475 478 ntBASIC3.3□□□□□ -1.88
CTNSO60931 RPS29P4-201ENST00000414733 161 ntBASIC3.3□□□□□ -1.88
CTNSO60931 MTCO3P4-201ENST00000419236 787 ntBASIC3.3□□□□□ -1.88
CTNSO60931 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.3□□□□□ -1.88
CTNSO60931 AL050321.1-201ENST00000432363 400 ntBASIC3.3□□□□□ -1.88
CTNSO60931 NEK4P1-201ENST00000433383 879 ntBASIC3.3□□□□□ -1.88
CTNSO60931 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNSO60931 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNSO60931 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.3□□□□□ -1.88
CTNSO60931 AC004801.2-202ENST00000463559 283 ntBASIC3.3□□□□□ -1.88
CTNSO60931 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.3□□□□□ -1.88
CTNSO60931 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.3□□□□□ -1.88
CTNSO60931 RPL21P129-201ENST00000491732 478 ntBASIC3.3□□□□□ -1.88
CTNSO60931 SETP14-201ENST00000497538 873 ntBASIC3.3□□□□□ -1.88
CTNSO60931 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTNSO60931 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.3□□□□□ -1.88
CTNSO60931 AC026784.1-201ENST00000507986 352 ntBASIC3.3□□□□□ -1.88
CTNSO60931 AC110792.2-201ENST00000510278 224 ntBASIC3.3□□□□□ -1.88
CTNSO60931 AC005921.1-201ENST00000510589 286 ntBASIC3.3□□□□□ -1.88
CTNSO60931 RN7SKP157-201ENST00000516174 282 ntBASIC3.3□□□□□ -1.88
CTNSO60931 IGKV2D-19-201ENST00000523346 262 ntBASIC3.3□□□□□ -1.88
CTNSO60931 OR8I1P-201ENST00000529291 931 ntBASIC3.3□□□□□ -1.88
CTNSO60931 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNSO60931 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.3□□□□□ -1.88
CTNSO60931 AC026333.2-201ENST00000542164 106 ntBASIC3.3□□□□□ -1.88
CTNSO60931 DUXAP6-201ENST00000553858 601 ntBASIC3.3□□□□□ -1.88
CTNSO60931 MIR1254-2-201ENST00000579553 63 ntBASIC3.3□□□□□ -1.88
CTNSO60931 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CTNSO60931 CBX3P2-202ENST00000583365 535 ntBASIC3.3□□□□□ -1.88
CTNSO60931 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNSO60931 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNSO60931 LLPHP1-201ENST00000603571 367 ntBASIC3.3□□□□□ -1.88
CTNSO60931 RMST_8.1-201ENST00000610287 165 ntBASIC3.3□□□□□ -1.88
CTNSO60931 AL592295.2-201ENST00000612578 206 ntBASIC3.3□□□□□ -1.88
CTNSO60931 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.3□□□□□ -1.88
CTNSO60931 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNSO60931 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNSO60931 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNSO60931 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
CTNSO60931 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CTNSO60931 AC073073.2-201ENST00000609827 2578 ntBASIC3.3□□□□□ -1.88
CTNSO60931 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTNSO60931 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CTNSO60931 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
CTNSO60931 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNSO60931 AL049737.1-201ENST00000413920 1403 ntBASIC3.29□□□□□ -1.88
CTNSO60931 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CTNSO60931 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNSO60931 AC083799.1-201ENST00000366451 910 ntBASIC3.29□□□□□ -1.88
CTNSO60931 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNSO60931 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CTNSO60931 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CTNSO60931 CCNB2P1-201ENST00000399411 1150 ntBASIC3.29□□□□□ -1.88
CTNSO60931 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.29□□□□□ -1.88
CTNSO60931 RNU2-65P-201ENST00000410162 185 ntBASIC3.29□□□□□ -1.88
CTNSO60931 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms