Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 SNORD108-201ENST00000459332 71 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 RPL31P50-201ENST00000471002 296 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC012170.1-201ENST00000495139 359 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC023424.1-201ENST00000496058 459 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 DSTNP2-201ENST00000504533 515 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-709P-201ENST00000517257 104 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 OR6C7P-201ENST00000547875 934 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 MIR3915-201ENST00000578518 97 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AP001004.1-201ENST00000582468 324 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 MTCYBP22-201ENST00000603788 447 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 IGHV3-29-201ENST00000604817 344 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC007497.1-201ENST00000610421 561 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC006329.2-201ENST00000611491 394 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AL161616.1-201ENST00000611867 286 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AL022401.1-201ENST00000619498 108 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC007494.3-201ENST00000624660 743 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 MAPK10-263ENST00000641052 4307 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC012618.3-205ENST00000637896 1496 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 AC090337.1-201ENST00000579651 2074 ntBASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL4A3BPQ9Y5P4 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 MAPK10-349ENST00000641767 3661 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-28P-201ENST00000362378 107 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 RN7SKP115-201ENST00000363177 317 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU4-40P-201ENST00000364351 143 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-837P-201ENST00000391056 108 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 CKS1BP6-201ENST00000424932 240 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 RWDD4P2-201ENST00000426392 563 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AL590233.1-201ENST00000430017 456 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AL451139.1-201ENST00000434718 346 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 ISCA1P2-201ENST00000438679 421 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 HMGB1P15-201ENST00000453854 435 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC017015.1-201ENST00000477387 286 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 RPS6P4-201ENST00000494693 758 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 DEFB109D-201ENST00000529497 240 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 PIGPP4-201ENST00000584447 307 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC010620.1-201ENST00000601088 1102 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 NCLP2-201ENST00000416078 1462 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 KARSP3-201ENST00000571212 1504 ntBASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL4A3BPQ9Y5P4 AL731566.1-201ENST00000620490 1937 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AL031985.3-201ENST00000565390 2449 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 AC008549.2-201ENST00000333482 706 ntBASIC5.36□□□□□ -1.55
COL4A3BPQ9Y5P4 RNU6-433P-201ENST00000363216 104 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms