Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 AC008555.7-201ENST00000605008 583 ntBASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 AC141002.1-201ENST00000607025 279 ntBASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 AL161931.1-201ENST00000612768 246 ntBASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 AC120057.5-201ENST00000623840 154 ntBASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 MIR665-201ENST00000635949 72 ntBASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
VPS9D1Q9Y2B5 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 IRF5P1-201ENST00000504852 2164 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 MAPK10-323ENST00000641493 3207 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC022031.1-201ENST00000585985 2593 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 EOGT-210ENST00000615922 1931 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 RNU6-1255P-201ENST00000363434 112 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 Y_RNA.439-201ENST00000384119 94 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 Y_RNA.581-201ENST00000391017 97 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC017079.2-201ENST00000416102 485 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC093414.1-201ENST00000434712 514 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 RN7SL382P-201ENST00000482631 282 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC027288.2-201ENST00000553028 243 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 RN7SL657P-201ENST00000582431 293 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ELOCP5-201ENST00000604924 333 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AL161616.1-201ENST00000611867 286 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC000123.2-201ENST00000623124 461 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 MTND1P7-201ENST00000632801 297 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC008725.1-201ENST00000605123 2263 ntBASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VPS9D1Q9Y2B5 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC083806.2-201ENST00000617795 2685 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 RBBP8P1-201ENST00000449447 1844 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 Y_RNA.568-201ENST00000384742 113 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 MIR431-201ENST00000385266 114 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC009362.1-201ENST00000427253 406 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC093106.2-201ENST00000428212 385 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC092423.1-201ENST00000430165 186 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC009518.3-201ENST00000438972 253 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 DAP3P1-201ENST00000441522 278 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 CRYGGP-201ENST00000443337 145 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 TPT1P13-201ENST00000449760 499 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC114982.1-201ENST00000469402 321 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AL139099.1-201ENST00000497398 403 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC074133.1-201ENST00000515696 183 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 RN7SKP11-201ENST00000517018 287 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.85□□□□□ -1.31
VPS9D1Q9Y2B5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms