Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC090602.1-201ENST00000469695 252 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 RPL32P9-201ENST00000487963 407 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 LRRC34P2-201ENST00000514850 553 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 RN7SKP35-201ENST00000517210 151 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 IGKV3D-25-201ENST00000519599 235 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 PHBP17-201ENST00000528576 541 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 CBX3P7-201ENST00000532876 502 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC068768.2-201ENST00000602352 343 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC092266.1-201ENST00000610958 165 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AC099494.2-201ENST00000623371 978 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 AP002505.2-201ENST00000623585 696 ntBASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.71□□□□□ -1.5
VTI1BQ9UEU0 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 COX6B1P3-201ENST00000312310 260 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 MIR1250-201ENST00000408098 113 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 RN7SKP247-201ENST00000411094 308 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 RPS4XP5-201ENST00000419038 768 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 CHIAP3-201ENST00000423668 1133 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 EIF1P3-201ENST00000423841 334 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 LYPLA1P1-201ENST00000434514 622 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AL445928.1-201ENST00000435545 222 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 RPS12P17-201ENST00000438591 377 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 MED28P3-201ENST00000444288 531 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 FTLP8-201ENST00000446770 267 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 MEMO1P4-201ENST00000453590 386 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 RNU7-63P-201ENST00000459054 62 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 SNORD125-201ENST00000459538 96 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AL049714.1-201ENST00000466686 347 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC008629.2-201ENST00000503783 483 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC011979.2-201ENST00000527568 352 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 GLUD1P4-201ENST00000590914 418 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC073488.3-201ENST00000631611 778 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 DHX40P1-201ENST00000588725 1412 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 AC109446.4-201ENST00000623235 2755 ntBASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VTI1BQ9UEU0 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 QRSL1P1-201ENST00000400977 1540 ntBASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 RNU6-989P-201ENST00000362756 107 ntBASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 AC019155.1-201ENST00000382242 574 ntBASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 Y_RNA.493-201ENST00000384422 102 ntBASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 RNU6-821P-201ENST00000390995 107 ntBASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 GLULP6-201ENST00000399502 913 ntBASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.69□□□□□ -1.5
VTI1BQ9UEU0 RPS17P13-201ENST00000448974 407 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms