Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AP000919.1-202ENST00000581139 1264 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC020914.6-201ENST00000594327 272 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC026741.1-201ENST00000605892 482 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AP000553.6-201ENST00000641242 118 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 AC090229.1-201ENST00000590983 1609 ntBASIC3.3□□□□□ -1.88
CLCF1Q9UBD9 LINC00561-201ENST00000565815 2738 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 BDP1P-201ENST00000582658 1990 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 RPL7P4-203ENST00000430239 730 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 HMGN2P31-201ENST00000432430 273 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 ATP5HP2-201ENST00000433885 485 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 FABP5P3-201ENST00000437960 408 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 UBE2V1P5-201ENST00000440070 405 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 DNAJC19P8-201ENST00000452887 259 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AL645939.1-201ENST00000453429 797 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 MRPL35P4-201ENST00000453682 566 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC005726.1-201ENST00000494679 427 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC110792.2-201ENST00000510278 224 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 RPL7L1P13-201ENST00000511702 739 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 RANP9-201ENST00000519957 271 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 CBX3P5-201ENST00000552017 521 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC006960.3-201ENST00000561845 705 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 CCDC58P3-201ENST00000590792 430 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AL158211.2-201ENST00000607282 395 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC018926.3-201ENST00000618841 406 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC092608.3-201ENST00000625017 386 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 AC119674.1-207ENST00000641355 633 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 FAM35DP-201ENST00000323387 2712 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.29□□□□□ -1.88
CLCF1Q9UBD9 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 OR6K3-202ENST00000368146 996 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 MIR525-201ENST00000384978 85 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 SNORA40.4-201ENST00000390971 128 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 SNORA11C-201ENST00000408532 129 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 RNA5SP239-201ENST00000410218 129 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 RNA5SP44-201ENST00000410446 133 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 RPS3AP25-201ENST00000411660 793 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 RPS29P4-201ENST00000414733 161 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC114814.2-201ENST00000419195 485 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 HSPD1P21-201ENST00000436541 245 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 HMGB1P48-201ENST00000446155 598 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 AC073387.1-201ENST00000453261 709 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 SNORD105B-201ENST00000458770 79 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 TRBV12-2-201ENST00000489763 344 ntBASIC3.28□□□□□ -1.88
CLCF1Q9UBD9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms