Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AL136097.1-201ENST00000456945 913 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AP001486.1-201ENST00000463339 476 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 RN7SL807P-201ENST00000470923 297 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 RPS29P2-201ENST00000479278 136 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AC114967.1-201ENST00000504890 259 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 APOOP4-201ENST00000513530 597 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AC016550.3-201ENST00000515706 767 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 AC100793.4-201ENST00000613683 429 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC88CQ9P219 MFSD8-233ENST00000641482 4860 ntBASIC3.06□□□□□ -1.92
CCDC88CQ9P219 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 SNORA38.1-201ENST00000364172 131 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 HMGB3P18-201ENST00000406327 590 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 VN1R31P-201ENST00000417498 730 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 RPL23AP67-201ENST00000465341 474 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC018552.3-201ENST00000567416 561 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 MIR2682-201ENST00000580305 110 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 MIR7851-201ENST00000610611 160 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 SNORA18.3-201ENST00000384122 132 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 PTP4A1P5-201ENST00000420305 455 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC012065.2-201ENST00000421295 375 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 RSL24D1P3-201ENST00000449255 495 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 TMED11P-201ENST00000479478 690 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC068724.1-201ENST00000487100 792 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 PTGES3P3-201ENST00000511479 482 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 USP9YP5-201ENST00000511770 630 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 SNORA70.14-201ENST00000516205 110 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 CR383656.14-201ENST00000551951 406 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC88CQ9P219 UBL5P2-201ENST00000583788 219 ntBASIC3.05□□□□□ -1.92
CCDC88CQ9P219 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 RNA5SP380-201ENST00000517190 98 ntBASIC3.04□□□□□ -1.92
CCDC88CQ9P219 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 OR4R3P-201ENST00000525084 838 ntBASIC3.04□□□□□ -1.92
CCDC88CQ9P219 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC88CQ9P219 AC009948.4-201ENST00000604692 675 ntBASIC3.04□□□□□ -1.92
CCDC88CQ9P219 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
CCDC88CQ9P219 AL049555.1-201ENST00000562834 1933 ntBASIC3.04□□□□□ -1.92
CCDC88CQ9P219 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 RNU6-805P-201ENST00000365643 106 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC069218.2-201ENST00000411665 344 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 OR6C71P-201ENST00000432580 913 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 Z99127.3-201ENST00000448158 395 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC112492.1-201ENST00000449607 712 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 RPL23AP62-201ENST00000463396 453 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC021205.2-201ENST00000480069 347 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC093014.1-201ENST00000548926 724 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AL159169.2-201ENST00000610061 1269 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AL157817.1-201ENST00000614264 790 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AL445437.1-201ENST00000623157 3087 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 MAPK10-373ENST00000641983 6772 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 SNORA62.2-201ENST00000364672 152 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 SNORA7.4-201ENST00000384249 137 ntBASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC88CQ9P219 AL353705.1-201ENST00000433468 480 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms