Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 MED28P5-201ENST00000528254 438 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 OR6C73P-201ENST00000546432 358 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 BNIP3P5-201ENST00000562290 498 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AC006254.3-201ENST00000603353 884 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AP004607.9-201ENST00000618202 316 ntBASIC3.44□□□□□ -1.86
TREX1Q9NSU2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.44□□□□□ -1.86
TREX1Q9NSU2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 RNU6ATAC-201ENST00000408749 126 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 RN7SKP202-201ENST00000410439 330 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 Z99755.1-201ENST00000414048 380 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 LINC01881-201ENST00000416103 412 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 RPL36AP36-201ENST00000418616 301 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 RPL17P36-201ENST00000420302 549 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 RPL34P26-201ENST00000445636 354 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AL133547.1-201ENST00000448546 220 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC097262.1-201ENST00000452559 548 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 PLGLA-201ENST00000465668 449 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC006130.2-201ENST00000586202 326 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC069304.3-201ENST00000603938 1084 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC092628.2-201ENST00000622492 339 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AC012442.3-202ENST00000636742 206 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AL157700.1-201ENST00000561973 1432 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 AL645937.1-201ENST00000641739 1652 ntBASIC3.43□□□□□ -1.86
TREX1Q9NSU2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TREX1Q9NSU2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 RNU1-64P-201ENST00000365443 163 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AL359837.1-201ENST00000381357 287 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 SNORD17-201ENST00000390930 237 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 RNA5SP31-201ENST00000411144 127 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AL513174.1-201ENST00000423182 629 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AC018644.1-201ENST00000429934 551 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 BX679664.1-201ENST00000434429 253 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 SETP5-201ENST00000437270 562 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 MTCYBP31-201ENST00000438855 1122 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 MED6P1-201ENST00000439659 713 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 RPL37P6-202ENST00000464216 403 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 RPL23AP67-201ENST00000465341 474 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 HMGN1P15-201ENST00000513870 295 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 PAICSP4-201ENST00000517543 1253 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AC107934.2-201ENST00000518653 310 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 TRMT10BP1-201ENST00000519377 943 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AC010928.3-201ENST00000587712 541 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 PCNAP1-202ENST00000595299 752 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.42□□□□□ -1.86
TREX1Q9NSU2 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.42□□□□□ -1.86
TREX1Q9NSU2 PRO1804-201ENST00000623780 2050 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms