Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RNU6-837P-201ENST00000391056 108 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 U3.29-201ENST00000391296 212 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 TPMTP2-201ENST00000414372 726 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 MTCO2P5-201ENST00000422621 426 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AL022400.1-201ENST00000423946 935 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AL627308.1-201ENST00000435693 821 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 MUPP-201ENST00000438111 566 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 CEACAMP7-201ENST00000444105 496 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC092647.2-201ENST00000452998 253 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AL445669.2-201ENST00000454425 421 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 RPS18P6-201ENST00000476880 458 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 LINC00888-204ENST00000487386 421 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 ATP1B1P1-201ENST00000509767 915 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC093281.2-201ENST00000510153 597 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC087477.6-201ENST00000559595 843 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AL121834.1-201ENST00000572284 509 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC106791.2-201ENST00000604680 391 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 COX6CP4-201ENST00000605798 228 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 EIF3FP1-201ENST00000613970 806 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC004009.2-201ENST00000623016 728 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AL359757.1-201ENST00000623176 255 ntBASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHB16Q9NRJ7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RNU1-83P-201ENST00000363426 164 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RNA5SP507-201ENST00000363603 121 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RNU6-1200P-201ENST00000384162 107 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RNU6-821P-201ENST00000390995 107 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AL121972.1-201ENST00000402023 252 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RNA5SP345-201ENST00000410646 108 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 MFSD13B-201ENST00000420133 1290 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 NANOGP6-201ENST00000429190 847 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 ZYG11AP1-201ENST00000430329 837 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RPS17P8-201ENST00000434525 335 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 MTND5P2-201ENST00000442927 1142 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 DDX39BP2-208ENST00000453923 258 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 SYPL1P1-201ENST00000473622 768 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 S100A11P1-201ENST00000477525 312 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AP000563.1-201ENST00000490865 758 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RPS4XP14-201ENST00000493072 781 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 PRELID3BP7-201ENST00000503606 469 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC010625.1-201ENST00000511296 403 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RNA5SP43-201ENST00000516559 110 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 RN7SKP66-201ENST00000516681 231 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC239860.2-201ENST00000525886 270 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AC025811.1-201ENST00000604312 472 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 MTND2P41-201ENST00000637599 773 ntBASIC4.12□□□□□ -1.75
PCDHB16Q9NRJ7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms