Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AL133162.1-201ENST00000463228 453 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 RPL5P24-201ENST00000463742 885 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 HMGN1P11-201ENST00000508668 303 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 MTND5P21-201ENST00000531961 522 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 GNRHR2P1-201ENST00000555315 631 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 SRGNP1-201ENST00000603392 451 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 IGHV3-29-201ENST00000604817 344 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AP000255.1-201ENST00000610276 676 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC124312.6-202ENST00000623624 418 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AC244205.2-202ENST00000635781 342 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 PABPC1P7-201ENST00000413177 1513 ntBASIC3.85□□□□□ -1.79
TM9SF3Q9HD45 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 LINC00561-201ENST00000565815 2738 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AL035423.1-201ENST00000420331 213 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AL139247.1-201ENST00000422768 325 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC005517.2-201ENST00000424673 553 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 HMGN2P31-201ENST00000432430 273 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 ZNF965P-201ENST00000432501 817 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 VN1R25P-201ENST00000443385 738 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 VN1R40P-201ENST00000455196 941 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 NF1P3-201ENST00000457709 450 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 NIPA2P2-201ENST00000496376 1083 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC010342.1-201ENST00000514047 877 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC007991.1-201ENST00000522680 631 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 IGKV2D-19-201ENST00000523346 262 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 RN7SL339P-201ENST00000580597 296 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC017100.2-201ENST00000584628 355 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AL161756.2-201ENST00000604597 246 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AC007179.3-201ENST00000604976 235 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AL034351.1-201ENST00000605288 668 ntBASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.84□□□□□ -1.79
TM9SF3Q9HD45 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TM9SF3Q9HD45 MTND5P28-201ENST00000438005 1594 ntBASIC3.84□□□□□ -1.8
TM9SF3Q9HD45 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.84□□□□□ -1.8
TM9SF3Q9HD45 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.84□□□□□ -1.8
TM9SF3Q9HD45 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.8
TM9SF3Q9HD45 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC007066.1-201ENST00000392902 381 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 RPL17P50-201ENST00000396131 546 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 ATP5F1P4-201ENST00000397288 746 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC007390.1-201ENST00000415722 356 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC083863.1-201ENST00000438811 231 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC114878.1-201ENST00000441166 358 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 RANP8-201ENST00000444720 713 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 RNU7-170P-201ENST00000459303 61 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC110768.1-201ENST00000509222 400 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 OR8I1P-201ENST00000529291 931 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 OR4A12P-201ENST00000530847 918 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 U7.8-201ENST00000619968 63 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 AL357559.1-201ENST00000622228 274 ntBASIC3.83□□□□□ -1.8
TM9SF3Q9HD45 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms