Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ISCA1P3-201ENST00000577104 373 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC022509.4-201ENST00000621404 572 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 MTND4P26-201ENST00000415971 1359 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC125336.1-201ENST00000508893 2827 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD1Q96PZ7 Y_RNA.164-201ENST00000363709 102 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 RN7SKP116-201ENST00000516902 319 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 MIR622-201ENST00000638396 96 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD1Q96PZ7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD1Q96PZ7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC073325.2-201ENST00000339545 159 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 Y_RNA.540-201ENST00000384638 111 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 AL445528.1-201ENST00000426330 420 ntBASIC2.56□□□□□ -2
CSMD1Q96PZ7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CSMD1Q96PZ7 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC2.56□□□□□ -2
CSMD1Q96PZ7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 U8.2-201ENST00000363156 134 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 HSPE1P8-201ENST00000406997 288 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 RN7SKP223-201ENST00000410582 62 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 OR9N1P-201ENST00000491296 333 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 AC105402.1-201ENST00000413336 545 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 AC083906.5-201ENST00000503722 328 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 KLHL2P1-201ENST00000508691 521 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 IGHV3-63-201ENST00000518422 341 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 OR11H5P-201ENST00000554039 926 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 DNAJC19P3-201ENST00000594491 331 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 AC005005.4-201ENST00000623789 16698 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 AC118273.1-201ENST00000525324 3006 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 HMGN2P8-201ENST00000391458 268 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 RPL23AP71-201ENST00000470966 469 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 AL360085.1-201ENST00000604713 532 ntBASIC2.55□□□□□ -2
CSMD1Q96PZ7 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.55□□□□□ -2
CSMD1Q96PZ7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSMD1Q96PZ7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 ATF1P1-201ENST00000406040 927 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 GAPDHP39-201ENST00000481866 979 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 AL442163.2-201ENST00000553912 710 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 FAM103A2P-201ENST00000444122 354 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 AC244517.3-201ENST00000616254 1235 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.54□□□□□ -2
CSMD1Q96PZ7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSMD1Q96PZ7 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
CSMD1Q96PZ7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms