Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNU2-10P-201ENST00000516375 211 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 RNU6-1069P-201ENST00000516612 133 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 HSPE1P2-201ENST00000554777 306 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC025884.1-201ENST00000556034 378 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 MIR3941-201ENST00000582572 103 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 HMGN2P28-201ENST00000606102 262 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AL021918.2-201ENST00000613415 194 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC245014.3-201ENST00000618589 347 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 AC021753.1-201ENST00000635724 168 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
LRCH3Q96II8 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LRCH3Q96II8 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 AL391262.1-201ENST00000556558 1992 ntBASIC6.99□□□□□ -1.29
LRCH3Q96II8 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC009313.2-201ENST00000417893 1941 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 Y_RNA.105-201ENST00000363182 111 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 RNU6-61P-201ENST00000365528 109 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 RNU6-842P-201ENST00000384269 107 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 RNU6-921P-201ENST00000384361 107 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 RNU6-735P-201ENST00000410612 107 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 RNU2-25P-201ENST00000411041 191 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC108059.3-201ENST00000456388 214 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 RN7SL834P-201ENST00000461450 286 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 AL671862.1-201ENST00000515851 349 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 RNA5SP228-201ENST00000516232 133 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 RN7SKP82-201ENST00000516786 223 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC087441.2-201ENST00000529141 262 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 AP000550.3-201ENST00000637734 379 ntBASIC6.98□□□□□ -1.29
LRCH3Q96II8 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
LRCH3Q96II8 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LRCH3Q96II8 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 Y_RNA.54-201ENST00000362766 105 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 Y_RNA.269-201ENST00000364685 89 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.97□□□□□ -1.29
LRCH3Q96II8 RNU6-317P-201ENST00000384031 107 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 SNORA51.6-201ENST00000384151 125 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 SNORA24.1-201ENST00000384401 135 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 RNU6-550P-201ENST00000391057 101 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 AL603910.2-201ENST00000407268 136 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 MIR1298-201ENST00000408783 112 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 RNU6-1203P-201ENST00000410703 110 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 RNU2-51P-201ENST00000410708 197 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 AL121916.1-201ENST00000429405 308 ntBASIC6.97□□□□□ -1.29
LRCH3Q96II8 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.97□□□□□ -1.29
LRCH3Q96II8 AC026801.1-201ENST00000497178 464 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms