Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 RNU6-1293P-201ENST00000384077 107 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 SNORD3H-201ENST00000384486 214 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 RN7SKP285-201ENST00000410137 318 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 RNU6-564P-201ENST00000410983 104 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 RPL21P66-201ENST00000426566 466 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 RPL7P2-201ENST00000427639 268 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 TXNP1-201ENST00000441872 371 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 snoU13.7-201ENST00000459220 104 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AL133162.1-201ENST00000463228 453 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 HMGB3P14-201ENST00000494195 599 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AC026784.1-201ENST00000507986 352 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AC008676.3-201ENST00000521237 435 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AC067959.1-201ENST00000604334 379 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AC016877.3-201ENST00000606778 504 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 U73479.1-201ENST00000618062 168 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 RNU6-156P-201ENST00000621869 107 ntBASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CLHC1Q8NHS4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 PWAR6-201ENST00000552334 4618 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC245054.1-201ENST00000420944 258 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 SDCBPP2-201ENST00000424643 885 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC004975.1-201ENST00000428733 208 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AL158071.1-201ENST00000430315 461 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 MRPS18BP2-201ENST00000434310 759 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 SSXP4-201ENST00000451349 245 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 MRPS31P2-201ENST00000451581 518 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 NUTF2P7-201ENST00000453086 375 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC107398.1-201ENST00000486904 505 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 RNU6-491P-201ENST00000516099 110 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 RN7SKP141-201ENST00000516167 338 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 COX6B1P6-201ENST00000522347 255 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC104115.2-201ENST00000523026 687 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AF279873.1-201ENST00000523393 313 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 OR4T1P-201ENST00000554933 911 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 HSPE1P5-201ENST00000561489 272 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AL359535.1-201ENST00000612100 1087 ntBASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLHC1Q8NHS4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AP001350.1-201ENST00000601906 1524 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 RPL7P26-201ENST00000333817 754 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 RNU4-23P-201ENST00000362839 140 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AL356806.1-201ENST00000422524 916 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 Z77249.1-201ENST00000444622 1175 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 HMGB1P48-201ENST00000446155 598 ntBASIC3.41□□□□□ -1.86
CLHC1Q8NHS4 MTND3P6-201ENST00000485242 339 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms