Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 RPL7P15-201ENST00000461190 712 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 HMGB1P21-201ENST00000502313 581 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AC005921.1-201ENST00000510589 286 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 OR5D17P-201ENST00000531492 978 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 GTF2IP22-201ENST00000554443 182 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AC021755.1-201ENST00000559747 1447 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AL845331.3-202ENST00000562856 261 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 CBX3P2-202ENST00000583365 535 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AC005242.1-201ENST00000585658 438 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 RNA5SP108-201ENST00000605921 117 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AC004775.1-201ENST00000607389 753 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AL592295.2-201ENST00000612578 206 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AC022149.2-201ENST00000621061 203 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 U4.6-201ENST00000621618 127 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 AC116563.2-201ENST00000624751 535 ntBASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC65Q8IXS2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.9□□□□□ -1.78
CCDC65Q8IXS2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CCDC65Q8IXS2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC65Q8IXS2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CCDC65Q8IXS2 RNF6P1-201ENST00000444889 1784 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 FRG1CP-201ENST00000358464 769 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 SNORA31-201ENST00000362607 130 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 RNU6-317P-201ENST00000384031 107 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 SNORA5A-201ENST00000384111 134 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 MIR554-201ENST00000384874 96 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 FABP12P1-201ENST00000401911 322 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AL356967.1-201ENST00000406305 431 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 MTND3P20-201ENST00000407663 186 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 RAB9AP3-201ENST00000412737 573 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 DBIP2-201ENST00000419076 262 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AL158071.1-201ENST00000430315 461 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AL357552.1-201ENST00000445254 415 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 RAB9AP1-201ENST00000449393 573 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 MTND2P8-201ENST00000450555 1025 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC073387.1-201ENST00000453261 709 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC004801.2-202ENST00000463559 283 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 FCF1P3-201ENST00000496394 590 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC104619.4-201ENST00000510773 249 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 OR5H4P-201ENST00000510851 923 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC010265.1-201ENST00000513509 211 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 RNU1-45P-201ENST00000517191 141 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 PAICSP4-201ENST00000517543 1253 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AL020997.2-201ENST00000602607 184 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 MIR7851-201ENST00000610611 160 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 PLCE1P1-201ENST00000622094 305 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AL356490.1-201ENST00000623079 479 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 SNORA50A-202ENST00000629536 136 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 AL353743.4-201ENST00000422653 1547 ntBASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC65Q8IXS2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 Y_RNA.126-201ENST00000363382 111 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 RNU6-883P-201ENST00000384597 107 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 MIR591-201ENST00000385290 95 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC025750.1-201ENST00000399891 379 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AC105402.1-201ENST00000413336 545 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 CYCSP4-201ENST00000429682 331 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 MTND4LP7-201ENST00000431728 294 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AL359073.1-201ENST00000448036 403 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 AL133547.1-201ENST00000448546 220 ntBASIC3.89□□□□□ -1.79
CCDC65Q8IXS2 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms