Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HERC6Q8IVU3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 LINC01109-201ENST00000603837 3081 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 OR56B2P-201ENST00000317102 954 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 FAM133CP-201ENST00000332869 704 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 RNU5D-1-201ENST00000363299 116 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 RNU6-1243P-201ENST00000364028 107 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC119751.3-201ENST00000399720 670 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 SSXP10-201ENST00000402595 565 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 BTBD10P2-201ENST00000404779 676 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 RPL21P65-201ENST00000406094 466 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AL161449.1-201ENST00000414531 1199 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC092634.6-201ENST00000418558 192 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 COX6B1P7-201ENST00000430845 235 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 ATP5F1P1-201ENST00000433775 569 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 RPS26P2-201ENST00000440331 348 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC114495.1-201ENST00000441274 436 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC091564.1-201ENST00000464563 479 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC112673.1-201ENST00000513168 575 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 OR5BC1P-201ENST00000529327 739 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC022882.1-201ENST00000532142 501 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 LRRC34P1-201ENST00000542742 915 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AGGF1P8-201ENST00000562979 1000 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 MIR4458-201ENST00000578872 75 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 MIR3944-201ENST00000581277 108 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC067852.4-201ENST00000590314 478 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 NIFKP6-201ENST00000598115 845 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC008739.3-201ENST00000603262 127 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC004987.4-201ENST00000603383 338 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 DUXAP3-201ENST00000603616 594 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AL451086.1-201ENST00000605596 223 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC069209.1-201ENST00000619282 651 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC007546.1-201ENST00000619452 559 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 ELL2P4-201ENST00000446870 1376 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 CDR1-202ENST00000625883 1485 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 RLIMP1-201ENST00000339626 1680 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
HERC6Q8IVU3 AC109315.1-201ENST00000584143 1347 ntBASIC4.72□□□□□ -1.65
HERC6Q8IVU3 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HERC6Q8IVU3 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
HERC6Q8IVU3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
HERC6Q8IVU3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.71□□□□□ -1.65
HERC6Q8IVU3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 Y_RNA.192-201ENST00000363977 102 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 MIR200C-201ENST00000384980 68 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 SNORD96B-201ENST00000386148 79 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AL583835.1-201ENST00000399570 407 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 RNU2-21P-201ENST00000410368 188 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AL133384.1-201ENST00000412744 351 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC073136.2-201ENST00000417282 849 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC006960.1-201ENST00000419980 153 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 USP9YP11-201ENST00000427537 717 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AL050321.1-201ENST00000432363 400 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC073587.1-201ENST00000447093 876 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 MTCO1P48-201ENST00000448024 1096 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 RPL21P134-201ENST00000453468 483 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 ANKRD26P4-201ENST00000455755 950 ntBASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.71□□□□□ -1.66
HERC6Q8IVU3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms