Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RPL37P1-201ENST00000432310 284 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 BX679664.1-201ENST00000434429 253 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 RPL6P9-201ENST00000466502 859 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC073522.1-201ENST00000483312 377 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 RN7SL323P-201ENST00000494712 295 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC110768.1-201ENST00000509222 400 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-1102P-201ENST00000516149 96 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 RNU6-352P-201ENST00000516908 107 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC010306.1-201ENST00000523223 1117 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 DUXAP6-201ENST00000553858 601 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 ZNF192P1-203ENST00000565888 810 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 MIR3186-201ENST00000577404 85 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 ZNF92P2-201ENST00000600543 1059 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC125494.3-201ENST00000602759 455 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC112503.1-201ENST00000608436 391 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 MIR6716-201ENST00000613413 80 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 STMN1P1-201ENST00000617809 440 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC024595.1-201ENST00000623088 387 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 MIR7153-201ENST00000637758 57 ntBASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
NUDCD3Q8IVD9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 ENSAP3-201ENST00000312710 333 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 SNORA31-201ENST00000362607 130 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 UBE2V1P11-201ENST00000411559 285 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AC069218.2-201ENST00000411665 344 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 COX6CP17-201ENST00000421389 185 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 NEK4P1-201ENST00000433383 879 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AL357552.1-201ENST00000445254 415 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 HMGB1P48-201ENST00000446155 598 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 MRPL35P4-201ENST00000453682 566 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AC010468.1-201ENST00000461022 817 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 RPS7P7-201ENST00000463499 571 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 RPS20P21-201ENST00000466859 343 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 FTH1P21-201ENST00000512179 511 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AP001636.2-201ENST00000525517 696 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 HIGD1AP5-201ENST00000529959 259 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AC027104.1-201ENST00000563702 681 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AL606490.9-201ENST00000603331 271 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 MIR378J-201ENST00000611988 109 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 MIR6864-201ENST00000617935 70 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AL357559.1-201ENST00000622228 274 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 AP001148.1-201ENST00000624124 2359 ntBASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NUDCD3Q8IVD9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 RNA5SP27-201ENST00000363839 119 ntBASIC3.53□□□□□ -1.84
NUDCD3Q8IVD9 SNORA62-201ENST00000365493 153 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms