Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC098591.2-201ENST00000510152 315 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 FAM206BP-201ENST00000510179 541 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 IGLVIV-64-201ENST00000518581 301 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AC090572.1-201ENST00000519251 160 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 MRPS16P1-201ENST00000523462 412 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AP002373.2-201ENST00000541631 1060 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AC090502.2-201ENST00000549267 280 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 MIR3118-1-201ENST00000581787 76 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 MIR4420-201ENST00000583944 77 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AC137590.2-201ENST00000619709 240 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AL162373.1-201ENST00000620433 407 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 MTND5P19-201ENST00000424872 1794 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.28□□□□□ -1.56
ATG4DQ86TL0 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG4DQ86TL0 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 DNM1P47-203ENST00000571780 12667 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 MSL3P1-202ENST00000440028 1468 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC092070.2-203ENST00000598377 3644 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 RNU6-1032P-201ENST00000384100 107 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 RPS6P23-201ENST00000413224 722 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 MCFD2P1-201ENST00000417812 300 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 RPS3AP54-201ENST00000435535 734 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 HMGB3P11-201ENST00000440127 604 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC107399.1-201ENST00000451226 265 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 RPL37P3-201ENST00000456825 293 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 TRBV1-201ENST00000476502 284 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 RN7SL57P-201ENST00000493687 290 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC104109.1-201ENST00000498563 436 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 SNORD46.2-201ENST00000516021 102 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 SUMO2P20-201ENST00000520803 283 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AP000889.1-201ENST00000530968 660 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC092121.1-201ENST00000569452 202 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AP001029.3-201ENST00000588063 596 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 NANOGP3-201ENST00000605855 286 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AL391813.2-201ENST00000609113 322 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC004696.1-201ENST00000614345 607 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC007485.1-201ENST00000616755 206 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC018926.3-201ENST00000618841 406 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC105074.1-201ENST00000623380 3095 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC091953.2-201ENST00000623979 160 ntBASIC5.27□□□□□ -1.57
ATG4DQ86TL0 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATG4DQ86TL0 AC000095.2-202ENST00000637415 154 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms