Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 CBX3P1-201ENST00000325243 554 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 RNU6-819P-201ENST00000364116 107 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 Y_RNA.394-201ENST00000383942 103 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 RNU6-152P-201ENST00000384037 107 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 RNA5SP36-201ENST00000410197 133 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 RPS20P15-201ENST00000412792 311 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 PGBD4P8-201ENST00000412993 562 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 VTA1P1-201ENST00000414044 866 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 UBTFL3-201ENST00000418934 1024 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 COX6CP17-201ENST00000421389 185 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 CDC27P1-201ENST00000445384 715 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 ABCF2P2-201ENST00000450549 296 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC009963.2-201ENST00000453431 138 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AL583843.1-201ENST00000456070 346 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 UBTFL6-201ENST00000477929 1024 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC069439.1-201ENST00000494739 167 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 ATG10-AS1-201ENST00000504846 648 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 MTATP6P22-201ENST00000507369 598 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 CCDC34P1-201ENST00000507441 517 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 BTG4P1-201ENST00000510421 183 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 MTND3P22-201ENST00000510932 243 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC091965.2-201ENST00000512324 613 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 MTCO1P35-201ENST00000515270 228 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 RNU6-405P-201ENST00000516637 110 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC006064.5-201ENST00000541782 248 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 EIF5A2P1-201ENST00000564027 460 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 MIR3939-201ENST00000582614 106 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC090616.2-202ENST00000584248 222 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AL390816.3-201ENST00000604527 1066 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC090578.1-201ENST00000604955 591 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC112220.3-201ENST00000605502 502 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 FAM27D1-201ENST00000612308 341 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AC009704.2-201ENST00000618739 483 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 AL023881.1-201ENST00000621088 301 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 MTND4P1-201ENST00000457501 1466 ntBASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
BHLHA9Q7RTU4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 MTCO1P23-201ENST00000415223 1526 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 RNU6-697P-201ENST00000363348 107 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 RNU6-729P-201ENST00000384399 107 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 MTCO3P31-201ENST00000405526 789 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AL355615.1-201ENST00000406187 641 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 RN7SKP33-201ENST00000410942 340 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 RAB28P1-201ENST00000411517 641 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 OR6K4P-201ENST00000423179 955 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 USP9YP18-201ENST00000425912 695 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AL445528.1-201ENST00000426330 420 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AC010975.2-201ENST00000427781 588 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 RPS7P2-201ENST00000435134 607 ntBASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.48□□□□□ -1.69
BHLHA9Q7RTU4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms