Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 IGLVIV-64-201ENST00000518581 301 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC022360.1-201ENST00000521058 340 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 CYCSP25-201ENST00000525280 316 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC022882.1-201ENST00000532142 501 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AP004609.2-201ENST00000532177 190 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 IMMP1LP2-201ENST00000552954 492 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 MIR132-201ENST00000591554 101 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC245052.7-201ENST00000601161 359 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC023509.5-201ENST00000617434 807 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AL732372.2-225ENST00000642124 456 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC140479.2-201ENST00000421567 3130 ntBASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
FOXR1Q6PIV2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC016583.1-201ENST00000624221 2431 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AL136984.1-201ENST00000607611 1893 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC104966.1-201ENST00000467010 1464 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AL512646.1-201ENST00000269395 1077 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 RNY1P12-201ENST00000364251 105 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 Y_RNA.463-201ENST00000384271 102 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 Y_RNA.530-201ENST00000384587 101 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AL109755.1-201ENST00000401791 649 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 RN7SKP296-201ENST00000411185 341 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 PRELID3BP11-201ENST00000414230 479 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 RPL6P29-201ENST00000414863 865 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 RPS15AP12-201ENST00000419498 388 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC005019.1-201ENST00000436455 431 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 MTND6P5-201ENST00000448266 512 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AP002453.1-201ENST00000492327 668 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AL049874.2-201ENST00000492636 288 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 RPL19P11-201ENST00000495944 589 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 GZMAP1-201ENST00000503054 631 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 RNA5SP418-201ENST00000515951 117 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC008083.2-201ENST00000546707 476 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC124916.2-201ENST00000604416 224 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC012409.4-201ENST00000612923 249 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AL080312.2-201ENST00000613001 630 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AC073488.9-201ENST00000631601 754 ntBASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXR1Q6PIV2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 AP001541.1-201ENST00000623322 1904 ntBASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 SNORA62.2-201ENST00000364672 152 ntBASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 RNU6-33P-201ENST00000384793 107 ntBASIC6.29□□□□□ -1.4
FOXR1Q6PIV2 AC004386.1-201ENST00000393214 761 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms