Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 ATG4AP1-201ENST00000416893 538 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC062016.2-201ENST00000420950 676 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC241584.1-201ENST00000438469 1241 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 NPM1P49-201ENST00000448027 714 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 FTH1P24-201ENST00000503502 462 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC093824.1-201ENST00000508796 343 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 MTCO2P32-201ENST00000514865 403 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 SOD1P3-201ENST00000518682 454 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC090502.2-201ENST00000549267 280 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC010857.1-201ENST00000606398 594 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 SNORD91B-202ENST00000608459 222 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AL031667.3-201ENST00000620124 655 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AL359715.5-201ENST00000623431 443 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AL392088.2-201ENST00000637607 285 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC025125.1-201ENST00000624743 1922 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AL592182.3-201ENST00000642132 3304 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 AC139713.2-215ENST00000641428 5037 ntBASIC4.95□□□□□ -1.62
SLC44A4Q53GD3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 MAPK10-320ENST00000641462 6696 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 OR56B2P-202ENST00000641377 2453 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 OR4A15-201ENST00000314706 1035 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 Y_RNA.559-201ENST00000384686 107 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AL031577.2-201ENST00000404133 280 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 RNA5SP345-201ENST00000410646 108 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AC129850.1-201ENST00000436203 508 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AP000936.2-201ENST00000447151 681 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 RPL23AP35-201ENST00000451906 501 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 RPS6P4-201ENST00000494693 758 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 SLC25A15P5-201ENST00000508033 253 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 RNU6-678P-201ENST00000516832 109 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AL109766.1-201ENST00000555080 552 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 ACTR3BP3-201ENST00000565577 979 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AGGF1P4-201ENST00000568249 801 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AC010546.1-201ENST00000569391 485 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 MIR3160-1-201ENST00000577972 85 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AC023575.1-201ENST00000580510 358 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AC069061.3-201ENST00000582254 823 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 WISP1-OT1-201ENST00000602893 642 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AL109618.2-201ENST00000605527 211 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AL139286.2-201ENST00000606838 396 ntBASIC4.94□□□□□ -1.62
SLC44A4Q53GD3 AP001521.1-201ENST00000609150 300 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms