Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-56P-201ENST00000516986 93 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3□□□□□ -1.93
CCDC58Q4VC31 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC58Q4VC31 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3□□□□□ -1.93
CCDC58Q4VC31 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3□□□□□ -1.93
CCDC58Q4VC31 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3□□□□□ -1.93
CCDC58Q4VC31 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3□□□□□ -1.93
CCDC58Q4VC31 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3□□□□□ -1.93
CCDC58Q4VC31 AC006116.10-201ENST00000591836 581 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 AC006023.2-201ENST00000609916 167 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 MIR6820-201ENST00000611508 62 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3□□□□□ -1.93
CCDC58Q4VC31 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 SNORD39.4-201ENST00000620099 78 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3□□□□□ -1.93
CCDC58Q4VC31 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC58Q4VC31 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC58Q4VC31 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
CCDC58Q4VC31 MTND5P3-201ENST00000438536 1800 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC58Q4VC31 BCLAF1P1-201ENST00000505813 2752 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
CCDC58Q4VC31 RNF6P1-201ENST00000444889 1784 ntBASIC3□□□□□ -1.93
CCDC58Q4VC31 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 SNORA51.2-201ENST00000364595 132 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 MRPL50P2-201ENST00000416821 482 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AC006960.1-201ENST00000419980 153 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AC140076.1-201ENST00000449897 361 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 VN1R105P-201ENST00000486595 910 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AC112198.1-201ENST00000505369 1220 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 MIR2116-201ENST00000517221 80 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 RNU4-60P-201ENST00000517239 135 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AGGF1P6-201ENST00000569213 976 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 uc_338.9-201ENST00000617424 182 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AC092447.7-201ENST00000422212 1621 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC58Q4VC31 AC090337.1-201ENST00000579651 2074 ntBASIC2.99□□□□□ -1.93
CCDC58Q4VC31 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 RNA5SP283-201ENST00000365604 119 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 ETF1P3-201ENST00000430422 1160 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC109583.1-201ENST00000432156 268 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC093716.1-201ENST00000435923 377 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 OR6K1P-201ENST00000456766 971 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 KLHL2P1-201ENST00000508691 521 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC007991.1-201ENST00000522680 631 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC067852.3-201ENST00000589177 561 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC243654.2-201ENST00000612843 443 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 MIR6875-201ENST00000617506 72 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC139769.3-201ENST00000618383 175 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 AC022079.2-201ENST00000619739 566 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 U4.6-201ENST00000621618 127 ntBASIC2.98□□□□□ -1.93
CCDC58Q4VC31 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC58Q4VC31 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC092435.3-201ENST00000565538 3654 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC107081.3-201ENST00000612715 2034 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AL356317.1-201ENST00000396110 1436 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 SNORA7.2-201ENST00000364446 145 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RNA5SP51-201ENST00000364750 119 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 MIR585-201ENST00000384887 94 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC007066.1-201ENST00000392902 381 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RPL21P75-201ENST00000396599 483 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RPL21P28-201ENST00000401418 483 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AL592114.1-201ENST00000403842 483 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RNU6-628P-201ENST00000410675 107 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 TCEA1P4-201ENST00000415066 844 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 RPL32P35-201ENST00000415214 394 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 OR1AA1P-201ENST00000419597 916 ntBASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC58Q4VC31 OR2AS1P-201ENST00000427827 319 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms