Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 RN7SL98P-201ENST00000462271 300 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC087879.1-201ENST00000474343 374 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AP000893.1-201ENST00000474462 794 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RPE65Q16518 SNX5P1-201ENST00000505757 1041 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.32□□□□□ -1.72
RPE65Q16518 XKRY-201ENST00000510392 1100 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC018797.3-201ENST00000513388 1241 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.32□□□□□ -1.72
RPE65Q16518 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.32□□□□□ -1.72
RPE65Q16518 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.32□□□□□ -1.72
RPE65Q16518 RNU6-759P-201ENST00000516740 103 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.32□□□□□ -1.72
RPE65Q16518 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.32□□□□□ -1.72
RPE65Q16518 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.32□□□□□ -1.72
RPE65Q16518 NPM1P6-201ENST00000521088 871 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.32□□□□□ -1.72
RPE65Q16518 AP000790.1-201ENST00000528891 737 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 OR4A12P-201ENST00000530847 918 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.32□□□□□ -1.72
RPE65Q16518 LSM6P2-201ENST00000552208 177 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPE65Q16518 AC084757.1-201ENST00000559987 490 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AGGF1P8-201ENST00000562979 1000 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.32□□□□□ -1.72
RPE65Q16518 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.32□□□□□ -1.72
RPE65Q16518 VN1R90P-201ENST00000595717 726 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AP000811.1-201ENST00000603803 651 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 SNORD91B-202ENST00000608459 222 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC072039.2-201ENST00000608883 439 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AP001521.1-201ENST00000609150 300 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.32□□□□□ -1.72
RPE65Q16518 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.32□□□□□ -1.72
RPE65Q16518 MIR6810-201ENST00000622701 70 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AC091931.1-201ENST00000623488 728 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 AF246928.1-201ENST00000623768 87 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.32□□□□□ -1.72
RPE65Q16518 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.32□□□□□ -1.72
RPE65Q16518 AC010300.1-201ENST00000600671 5134 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.32□□□□□ -1.72
RPE65Q16518 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPE65Q16518 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.32□□□□□ -1.72
RPE65Q16518 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPE65Q16518 AP001273.1-201ENST00000624493 3152 ntBASIC4.32□□□□□ -1.72
RPE65Q16518 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPE65Q16518 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPE65Q16518 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RPE65Q16518 MTND5P28-201ENST00000438005 1594 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPE65Q16518 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.31□□□□□ -1.72
RPE65Q16518 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPE65Q16518 DDX18P3-201ENST00000404856 2007 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.31□□□□□ -1.72
RPE65Q16518 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RPE65Q16518 RPL32P3-201ENST00000359025 275 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 Y_RNA.18-201ENST00000362461 102 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPE65Q16518 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.31□□□□□ -1.72
RPE65Q16518 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.31□□□□□ -1.72
RPE65Q16518 CHIAP3-201ENST00000423668 1133 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AL138785.1-201ENST00000425821 331 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.31□□□□□ -1.72
RPE65Q16518 UBE2V1P3-201ENST00000439651 417 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPE65Q16518 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.31□□□□□ -1.72
RPE65Q16518 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPE65Q16518 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.31□□□□□ -1.72
RPE65Q16518 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPE65Q16518 MTCO3P2-201ENST00000457365 171 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 RPL7P1-201ENST00000468161 747 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 RPL7P9-201ENST00000468715 747 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AC026979.1-201ENST00000492525 396 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 ARL4AP1-201ENST00000503220 705 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.31□□□□□ -1.72
RPE65Q16518 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPE65Q16518 SNORD116-26-201ENST00000516006 96 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 RNA5SP360-201ENST00000516555 118 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC022882.1-201ENST00000532142 501 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.31□□□□□ -1.72
RPE65Q16518 MTCYBP28-201ENST00000566728 1132 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC107982.3-201ENST00000584957 985 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPE65Q16518 AC069304.2-201ENST00000605154 435 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AC124312.4-201ENST00000605533 310 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AC080013.6-201ENST00000606185 215 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AP002360.3-201ENST00000607673 710 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.31□□□□□ -1.72
RPE65Q16518 AC131238.1-201ENST00000617135 328 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 AC011944.2-201ENST00000624440 683 ntBASIC4.31□□□□□ -1.72
RPE65Q16518 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.31□□□□□ -1.72
RPE65Q16518 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms