Protein–RNA interactions for Protein: Q02880

TOP2B, DNA topoisomerase 2-beta, humanhuman

Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2BQ02880 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TOP2BQ02880 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.08□□□□□ -1.6
TOP2BQ02880 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.08□□□□□ -1.6
TOP2BQ02880 TOMM20P4-201ENST00000427861 435 ntBASIC5.08□□□□□ -1.6
TOP2BQ02880 PRDX3P4-201ENST00000470828 747 ntBASIC5.08□□□□□ -1.6
TOP2BQ02880 HMGB1P3-201ENST00000502802 616 ntBASIC5.08□□□□□ -1.6
TOP2BQ02880 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TOP2BQ02880 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
TOP2BQ02880 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TOP2BQ02880 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TOP2BQ02880 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
TOP2BQ02880 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
TOP2BQ02880 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC5.08□□□□□ -1.6
TOP2BQ02880 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.08□□□□□ -1.6
TOP2BQ02880 RNU4ATAC3P-201ENST00000516699 126 ntBASIC5.08□□□□□ -1.6
TOP2BQ02880 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.08□□□□□ -1.6
TOP2BQ02880 AC073476.4-201ENST00000628409 72 ntBASIC5.08□□□□□ -1.6
TOP2BQ02880 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.08□□□□□ -1.6
TOP2BQ02880 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
TOP2BQ02880 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP2BQ02880 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
TOP2BQ02880 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
TOP2BQ02880 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.07□□□□□ -1.6
TOP2BQ02880 RNA5SP184-201ENST00000411071 108 ntBASIC5.07□□□□□ -1.6
TOP2BQ02880 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.07□□□□□ -1.6
TOP2BQ02880 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.07□□□□□ -1.6
TOP2BQ02880 AL136097.1-201ENST00000456945 913 ntBASIC5.07□□□□□ -1.6
TOP2BQ02880 TRBV12-1-201ENST00000479785 344 ntBASIC5.07□□□□□ -1.6
TOP2BQ02880 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.07□□□□□ -1.6
TOP2BQ02880 RNA5SP367-201ENST00000516557 118 ntBASIC5.07□□□□□ -1.6
TOP2BQ02880 AC015871.2-201ENST00000603605 948 ntBASIC5.07□□□□□ -1.6
TOP2BQ02880 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.07□□□□□ -1.6
TOP2BQ02880 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TOP2BQ02880 AC007336.1-201ENST00000576365 3828 ntBASIC5.07□□□□□ -1.6
TOP2BQ02880 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP2BQ02880 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TOP2BQ02880 U3.12-201ENST00000364498 214 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 MIR504-201ENST00000385065 83 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 RPL21P112-201ENST00000434403 463 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 ATP5F1P5-201ENST00000526403 760 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 AC022882.1-201ENST00000532142 501 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TOP2BQ02880 AL512310.1-201ENST00000548639 172 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 AC231759.1-201ENST00000616455 597 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 HSPA8P1-201ENST00000425843 1833 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
TOP2BQ02880 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TOP2BQ02880 AC107027.3-201ENST00000565095 3473 ntBASIC5.06□□□□□ -1.6
TOP2BQ02880 SNORA9.2-201ENST00000365361 133 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 RNA5SP247-201ENST00000411181 105 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 AC073508.1-201ENST00000428866 656 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP2BQ02880 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP2BQ02880 AC083906.5-201ENST00000503722 328 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 TGIF1P1-201ENST00000558095 802 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP2BQ02880 CYCSP39-201ENST00000565821 309 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.05□□□□□ -1.6
TOP2BQ02880 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC5.05□□□□□ -1.6
TOP2BQ02880 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP2BQ02880 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOP2BQ02880 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TOP2BQ02880 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOP2BQ02880 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TOP2BQ02880 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
TOP2BQ02880 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TOP2BQ02880 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.05□□□□□ -1.6
TOP2BQ02880 XGY1-201ENST00000381172 446 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 RSL24D1P4-201ENST00000400938 484 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP2BQ02880 AC108938.1-201ENST00000451204 136 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 HMGN2P7-201ENST00000456186 273 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 AC079600.2-201ENST00000550076 130 ntBASIC5.05□□□□□ -1.6
TOP2BQ02880 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.05□□□□□ -1.6
TOP2BQ02880 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
TOP2BQ02880 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP2BQ02880 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
TOP2BQ02880 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TOP2BQ02880 RPS4XP8-201ENST00000402039 771 ntBASIC5.04□□□□□ -1.6
TOP2BQ02880 BX679664.1-201ENST00000434429 253 ntBASIC5.04□□□□□ -1.6
TOP2BQ02880 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.04□□□□□ -1.6
TOP2BQ02880 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.04□□□□□ -1.6
TOP2BQ02880 OR5G4P-201ENST00000525251 760 ntBASIC5.04□□□□□ -1.6
TOP2BQ02880 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.04□□□□□ -1.6
TOP2BQ02880 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2BQ02880 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TOP2BQ02880 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
TOP2BQ02880 SNORA70B-201ENST00000384210 135 ntBASIC5.03□□□□□ -1.6
TOP2BQ02880 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2BQ02880 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2BQ02880 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2BQ02880 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.03□□□□□ -1.6
TOP2BQ02880 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2BQ02880 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.03□□□□□ -1.6
TOP2BQ02880 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TOP2BQ02880 AL096803.3-201ENST00000609032 532 ntBASIC5.03□□□□□ -1.6
TOP2BQ02880 AC091903.1-201ENST00000624322 454 ntBASIC5.03□□□□□ -1.6
TOP2BQ02880 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TOP2BQ02880 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TOP2BQ02880 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms