Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 OR6C73P-201ENST00000546432 358 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AC092354.2-201ENST00000607786 514 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 AC007823.1-201ENST00000569932 1566 ntBASIC2.65□□□□□ -1.99
HIST1H1AQ02539 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
HIST1H1AQ02539 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 SNORD56.3-201ENST00000363507 71 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 U3.11-201ENST00000364476 212 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 SNORD3H-201ENST00000384486 214 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 RAB28P1-201ENST00000411517 641 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 MTND4P11-201ENST00000417020 1058 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC244033.1-201ENST00000426826 870 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 RPL21P40-201ENST00000428586 483 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 SSXP4-201ENST00000451349 245 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 NUTF2P7-201ENST00000453086 375 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 RNU7-27P-201ENST00000459281 62 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 ATG10-AS1-201ENST00000504846 648 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 MTND4LP31-201ENST00000514859 294 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 RN7SKP244-201ENST00000516513 307 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 RN7SKP282-201ENST00000516824 299 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC107934.2-201ENST00000518653 310 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC104027.1-201ENST00000521887 300 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AP003117.1-201ENST00000602771 554 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 U4.6-201ENST00000621618 127 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC112200.1-201ENST00000625015 234 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC068724.3-201ENST00000625906 87 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC119674.1-207ENST00000641355 633 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 GTF2H2B-203ENST00000508065 1432 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 AC004925.1-201ENST00000624256 2706 ntBASIC2.64□□□□□ -1.99
HIST1H1AQ02539 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.64□□□□□ -1.99
HIST1H1AQ02539 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 FRG1CP-201ENST00000358464 769 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 RNU6-600P-201ENST00000362524 99 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AL359837.1-201ENST00000381357 287 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 MIR887-201ENST00000401258 79 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AL445189.1-201ENST00000405722 338 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 RPL5P18-201ENST00000406671 891 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 BMS1P22-201ENST00000414726 313 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 CRYBB2P1-203ENST00000415709 538 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 RPL23AP82-202ENST00000427528 469 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC244505.4-201ENST00000434905 287 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 SETP8-201ENST00000435341 628 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 SSXP5-201ENST00000443473 287 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC093392.2-201ENST00000450682 337 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 CENPBD1P1-201ENST00000464061 469 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC022336.1-201ENST00000475510 337 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC021205.2-201ENST00000480069 347 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 NCOR1P1-202ENST00000486162 291 ntBASIC2.63□□□□□ -1.99
HIST1H1AQ02539 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.63□□□□□ -1.99
HIST1H1AQ02539 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms