Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCS1Q01581 RN7SL594P-201ENST00000470590 287 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 ACTR3P3-201ENST00000480448 893 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 TRAV31-201ENST00000502780 342 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 OR8K2P-201ENST00000524645 927 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 AP003168.1-201ENST00000530091 307 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 TGIF1P1-201ENST00000558095 802 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC025918.2-201ENST00000558683 763 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 MIR4425-201ENST00000580572 84 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 PCNAP1-202ENST00000595299 752 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 ZNF92P3-201ENST00000596594 954 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC007687.1-201ENST00000602704 304 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC103710.3-201ENST00000608157 948 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC034229.5-201ENST00000624258 185 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
HMGCS1Q01581 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.39□□□□□ -1.87
HMGCS1Q01581 AC090337.1-201ENST00000579651 2074 ntBASIC3.39□□□□□ -1.87
HMGCS1Q01581 RNU4-31P-201ENST00000384211 141 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 MIR142-201ENST00000384835 87 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 MIR153-1-201ENST00000384914 90 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 MTATP6P11-201ENST00000428071 670 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC018644.1-201ENST00000429934 551 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGCS1Q01581 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC017099.1-201ENST00000448261 1028 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 RPL23AP23-201ENST00000452590 471 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 MTND2P30-201ENST00000456663 382 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AP000563.1-201ENST00000490865 758 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 RPL7P47-201ENST00000497299 556 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 SETP14-201ENST00000497538 873 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 HMGN1P11-201ENST00000508668 303 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC025768.1-201ENST00000510057 267 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC110792.2-201ENST00000510278 224 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 RNU6-1102P-201ENST00000516149 96 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 CIR1P1-201ENST00000524055 1133 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AP000926.4-201ENST00000527351 454 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC005972.3-201ENST00000606304 481 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC069209.1-201ENST00000619282 651 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AP003355.3-201ENST00000623465 114 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 AC112200.1-201ENST00000625015 234 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 FRG1DP-201ENST00000635586 771 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGCS1Q01581 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGCS1Q01581 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGCS1Q01581 AL161912.2-201ENST00000565707 3007 ntBASIC3.38□□□□□ -1.87
HMGCS1Q01581 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HMGCS1Q01581 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HMGCS1Q01581 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HMGCS1Q01581 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 GTF2H2B-203ENST00000508065 1432 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 NMD3P1-201ENST00000439704 1488 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 RNA5SP124-201ENST00000362739 110 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 RNA5SP167-201ENST00000365461 116 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HMGCS1Q01581 RNU6-1005P-201ENST00000384519 107 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 RPL21P17-201ENST00000397467 475 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 RNU2-17P-201ENST00000410290 190 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 ATP5A1P2-201ENST00000412323 255 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC019070.1-201ENST00000415008 1024 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 LINC01347-201ENST00000417964 355 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AL035423.1-201ENST00000420331 213 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC073508.1-201ENST00000428866 656 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 PTP4A1P3-201ENST00000433661 420 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AL357552.1-201ENST00000445254 415 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 RPS3AP46-201ENST00000448352 682 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AL133547.1-201ENST00000448546 220 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.37□□□□□ -1.87
HMGCS1Q01581 AL353718.1-201ENST00000451028 517 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 HMGB3P30-201ENST00000457863 606 ntBASIC3.37□□□□□ -1.87
HMGCS1Q01581 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms