Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.18□□□□□ -2.06
PRKDCP78527 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC2.18□□□□□ -2.06
PRKDCP78527 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC2.18□□□□□ -2.06
PRKDCP78527 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKDCP78527 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.18□□□□□ -2.06
PRKDCP78527 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
PRKDCP78527 SYT14P1-202ENST00000600441 1448 ntBASIC2.18□□□□□ -2.06
PRKDCP78527 RNU2-52P-201ENST00000410680 190 ntBASIC2.18□□□□□ -2.06
PRKDCP78527 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC2.18□□□□□ -2.06
PRKDCP78527 RPL7L1P1-201ENST00000448259 785 ntBASIC2.18□□□□□ -2.06
PRKDCP78527 AC083906.5-201ENST00000503722 328 ntBASIC2.18□□□□□ -2.06
PRKDCP78527 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKDCP78527 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
PRKDCP78527 ALG13-230ENST00000623189 458 ntTSL 3 BASIC2.18□□□□□ -2.06
PRKDCP78527 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKDCP78527 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
PRKDCP78527 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
PRKDCP78527 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
PRKDCP78527 DUTP6-201ENST00000425573 462 ntBASIC2.18□□□□□ -2.06
PRKDCP78527 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.18□□□□□ -2.06
PRKDCP78527 AC106785.3-201ENST00000564064 847 ntBASIC2.18□□□□□ -2.06
PRKDCP78527 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.18□□□□□ -2.06
PRKDCP78527 AL157817.1-201ENST00000614264 790 ntBASIC2.18□□□□□ -2.06
PRKDCP78527 AC074276.2-201ENST00000619891 348 ntBASIC2.18□□□□□ -2.06
PRKDCP78527 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.18□□□□□ -2.06
PRKDCP78527 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
PRKDCP78527 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC2.17□□□□□ -2.06
PRKDCP78527 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
PRKDCP78527 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PRKDCP78527 LINC02471-203ENST00000641941 4752 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.17□□□□□ -2.06
PRKDCP78527 RNU6-859P-201ENST00000362728 107 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 MIR513A2-201ENST00000385249 127 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 RPS26P47-201ENST00000427219 348 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.17□□□□□ -2.06
PRKDCP78527 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.17□□□□□ -2.06
PRKDCP78527 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC2.17□□□□□ -2.06
PRKDCP78527 NPM1P29-201ENST00000483112 803 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 AC004057.1-201ENST00000485827 348 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 AC139713.2-215ENST00000641428 5037 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 RNA5SP289-201ENST00000362332 137 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 RN7SKP192-201ENST00000411291 327 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 UQCRHP3-201ENST00000451503 251 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.17□□□□□ -2.06
PRKDCP78527 SNORD39.4-201ENST00000620099 78 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.17□□□□□ -2.06
PRKDCP78527 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.17□□□□□ -2.06
PRKDCP78527 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 IFNNP1-201ENST00000429219 553 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.17□□□□□ -2.06
PRKDCP78527 RFPL4AP3-201ENST00000515267 345 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.17□□□□□ -2.06
PRKDCP78527 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.17□□□□□ -2.06
PRKDCP78527 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRKDCP78527 OR11H5P-201ENST00000554039 926 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 DNAJC19P3-201ENST00000594491 331 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 AC123768.4-201ENST00000616244 701 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.17□□□□□ -2.06
PRKDCP78527 AP002512.4-202ENST00000641599 4530 ntBASIC2.17□□□□□ -2.06
PRKDCP78527 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
PRKDCP78527 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.16□□□□□ -2.06
PRKDCP78527 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 AL136116.1-201ENST00000403591 381 ntBASIC2.16□□□□□ -2.06
PRKDCP78527 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.16□□□□□ -2.06
PRKDCP78527 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.16□□□□□ -2.06
PRKDCP78527 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.16□□□□□ -2.06
PRKDCP78527 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.16□□□□□ -2.06
PRKDCP78527 CYP2C60P-201ENST00000566088 139 ntBASIC2.16□□□□□ -2.06
PRKDCP78527 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.16□□□□□ -2.06
PRKDCP78527 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PRKDCP78527 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.16□□□□□ -2.06
PRKDCP78527 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.16□□□□□ -2.06
PRKDCP78527 NANOGP6-201ENST00000429190 847 ntBASIC2.16□□□□□ -2.06
PRKDCP78527 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.16□□□□□ -2.06
PRKDCP78527 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.16□□□□□ -2.06
PRKDCP78527 uc_338.1-201ENST00000612113 180 ntBASIC2.16□□□□□ -2.06
PRKDCP78527 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
PRKDCP78527 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.16□□□□□ -2.06
PRKDCP78527 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 OR5BR1P-201ENST00000524992 1330 ntBASIC2.16□□□□□ -2.06
PRKDCP78527 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PRKDCP78527 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PRKDCP78527 AC112198.2-201ENST00000426589 6996 ntBASIC2.16□□□□□ -2.06
PRKDCP78527 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms