Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SNORA70.18-201ENST00000516696 98 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNA1P78396 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.11□□□□□ -1.75
CCNA1P78396 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNA1P78396 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.11□□□□□ -1.75
CCNA1P78396 BNIP3P7-201ENST00000605641 516 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 AC018754.1-201ENST00000607486 925 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 OR2BH1P-201ENST00000608850 864 ntBASIC4.11□□□□□ -1.75
CCNA1P78396 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNA1P78396 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.11□□□□□ -1.75
CCNA1P78396 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CCNA1P78396 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCNA1P78396 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.1□□□□□ -1.75
CCNA1P78396 Y_RNA.111-201ENST00000363248 100 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 RNA5SP391-201ENST00000363456 119 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 SNORA11.2-201ENST00000408318 127 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 JKAMPP1-201ENST00000413804 919 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.1□□□□□ -1.75
CCNA1P78396 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.1□□□□□ -1.75
CCNA1P78396 RPS7P5-201ENST00000441482 581 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 RPS20P32-201ENST00000456044 356 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 SEPT14P1-201ENST00000458703 648 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 RPL37P6-202ENST00000464216 403 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 RPL23AP71-201ENST00000470966 469 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.1□□□□□ -1.75
CCNA1P78396 AC025518.1-201ENST00000479856 347 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 TRBV12-2-201ENST00000489763 344 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 AC139783.2-201ENST00000504847 1145 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 HNRNPKP5-201ENST00000515300 253 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 COX6B1P6-201ENST00000522347 255 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCNA1P78396 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.1□□□□□ -1.75
CCNA1P78396 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
CCNA1P78396 OR8L1P-201ENST00000534005 955 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.1□□□□□ -1.75
CCNA1P78396 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.1□□□□□ -1.75
CCNA1P78396 TRAV15-201ENST00000556680 249 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.1□□□□□ -1.75
CCNA1P78396 AP003392.5-201ENST00000607857 415 ntBASIC4.1□□□□□ -1.75
CCNA1P78396 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCNA1P78396 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.1□□□□□ -1.75
CCNA1P78396 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCNA1P78396 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.1□□□□□ -1.75
CCNA1P78396 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCNA1P78396 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CCNA1P78396 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.1□□□□□ -1.75
CCNA1P78396 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.09□□□□□ -1.75
CCNA1P78396 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.09□□□□□ -1.75
CCNA1P78396 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCNA1P78396 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
CCNA1P78396 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.09□□□□□ -1.75
CCNA1P78396 OR6K3-202ENST00000368146 996 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCNA1P78396 AL445528.1-201ENST00000426330 420 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 HMGN2P21-201ENST00000447764 270 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 ANP32BP2-201ENST00000454525 545 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 CEACAMP4-201ENST00000457676 421 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 AC092451.1-201ENST00000480211 153 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.09□□□□□ -1.75
CCNA1P78396 TRAV31-201ENST00000502780 342 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 AC025459.1-201ENST00000504072 156 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 RNU4-60P-201ENST00000517239 135 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.09□□□□□ -1.75
CCNA1P78396 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.09□□□□□ -1.75
CCNA1P78396 MTCO3P22-201ENST00000603219 784 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 AL390816.3-201ENST00000604527 1066 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 AC073111.2-201ENST00000605657 1075 ntBASIC4.09□□□□□ -1.75
CCNA1P78396 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.09□□□□□ -1.75
CCNA1P78396 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCNA1P78396 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCNA1P78396 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNA1P78396 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNA1P78396 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNA1P78396 RNA5SP189-201ENST00000364920 115 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.08□□□□□ -1.76
CCNA1P78396 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCNA1P78396 MTHFD2P2-201ENST00000407725 247 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCNA1P78396 RNA5SP306-201ENST00000411087 107 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 HSFY4P-201ENST00000415994 1181 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 OR4K6P-201ENST00000416478 897 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 AL592494.2-201ENST00000425455 1548 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.08□□□□□ -1.76
CCNA1P78396 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.08□□□□□ -1.76
CCNA1P78396 AC023598.1-201ENST00000472521 361 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 AC090543.1-201ENST00000492168 485 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.08□□□□□ -1.76
CCNA1P78396 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.08□□□□□ -1.76
CCNA1P78396 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.08□□□□□ -1.76
CCNA1P78396 AC005921.1-201ENST00000510589 286 ntBASIC4.08□□□□□ -1.76
CCNA1P78396 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.08□□□□□ -1.76
CCNA1P78396 RN7SKP209-201ENST00000516888 304 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms