Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
ACLYP53396 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ACLYP53396 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.86□□□□□ -1.79
ACLYP53396 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.86□□□□□ -1.79
ACLYP53396 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ACLYP53396 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
ACLYP53396 RPL23AP57-201ENST00000332361 466 ntBASIC3.86□□□□□ -1.79
ACLYP53396 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.86□□□□□ -1.79
ACLYP53396 AC017079.2-201ENST00000416102 485 ntBASIC3.86□□□□□ -1.79
ACLYP53396 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.86□□□□□ -1.79
ACLYP53396 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.86□□□□□ -1.79
ACLYP53396 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.86□□□□□ -1.79
ACLYP53396 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.86□□□□□ -1.79
ACLYP53396 MTND2P25-201ENST00000449028 610 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.86□□□□□ -1.79
ACLYP53396 S100A11P2-201ENST00000467589 312 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AC023598.1-201ENST00000472521 361 ntBASIC3.86□□□□□ -1.79
ACLYP53396 RPL21P13-201ENST00000488305 481 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AC025459.1-201ENST00000504072 156 ntBASIC3.86□□□□□ -1.79
ACLYP53396 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.86□□□□□ -1.79
ACLYP53396 FCF1P8-201ENST00000510322 597 ntBASIC3.86□□□□□ -1.79
ACLYP53396 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AC022784.5-201ENST00000522241 437 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AC012414.2-201ENST00000559474 187 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AC027807.1-201ENST00000559921 996 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.86□□□□□ -1.79
ACLYP53396 AL109741.3-201ENST00000561748 592 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.86□□□□□ -1.79
ACLYP53396 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.86□□□□□ -1.79
ACLYP53396 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ACLYP53396 AC067852.4-201ENST00000590314 478 ntBASIC3.86□□□□□ -1.79
ACLYP53396 CKS1BP3-201ENST00000600888 237 ntBASIC3.86□□□□□ -1.79
ACLYP53396 AC091905.1-201ENST00000624400 311 ntBASIC3.86□□□□□ -1.79
ACLYP53396 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.86□□□□□ -1.79
ACLYP53396 AC009452.1-201ENST00000640823 606 ntBASIC3.86□□□□□ -1.79
ACLYP53396 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ACLYP53396 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
ACLYP53396 Z83843.1-201ENST00000604070 3685 ntBASIC3.86□□□□□ -1.79
ACLYP53396 OTUD4P1-201ENST00000237841 3067 ntBASIC3.86□□□□□ -1.79
ACLYP53396 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.86□□□□□ -1.79
ACLYP53396 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACLYP53396 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ACLYP53396 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ACLYP53396 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACLYP53396 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACLYP53396 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.85□□□□□ -1.79
ACLYP53396 Y_RNA.510-201ENST00000384511 114 ntBASIC3.85□□□□□ -1.79
ACLYP53396 Z86062.1-201ENST00000406773 777 ntBASIC3.85□□□□□ -1.79
ACLYP53396 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ACLYP53396 AL031736.2-201ENST00000426573 787 ntBASIC3.85□□□□□ -1.79
ACLYP53396 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.85□□□□□ -1.79
ACLYP53396 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.85□□□□□ -1.79
ACLYP53396 UBE2DNL-203ENST00000474922 222 ntBASIC3.85□□□□□ -1.79
ACLYP53396 TMED11P-201ENST00000479478 690 ntBASIC3.85□□□□□ -1.79
ACLYP53396 RPS3AP14-201ENST00000483907 780 ntBASIC3.85□□□□□ -1.79
ACLYP53396 AC020893.1-201ENST00000502452 580 ntBASIC3.85□□□□□ -1.79
ACLYP53396 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.85□□□□□ -1.79
ACLYP53396 PRELID3BP7-201ENST00000503606 469 ntBASIC3.85□□□□□ -1.79
ACLYP53396 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.85□□□□□ -1.79
ACLYP53396 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.85□□□□□ -1.79
ACLYP53396 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.85□□□□□ -1.79
ACLYP53396 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.85□□□□□ -1.79
ACLYP53396 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.85□□□□□ -1.79
ACLYP53396 AL360157.1-201ENST00000565962 87 ntBASIC3.85□□□□□ -1.79
ACLYP53396 MIR4276-201ENST00000584832 70 ntBASIC3.85□□□□□ -1.79
ACLYP53396 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.85□□□□□ -1.79
ACLYP53396 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.85□□□□□ -1.79
ACLYP53396 AC015802.5-201ENST00000607478 399 ntBASIC3.85□□□□□ -1.79
ACLYP53396 AL162274.2-201ENST00000614406 332 ntBASIC3.85□□□□□ -1.79
ACLYP53396 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ACLYP53396 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.85□□□□□ -1.79
ACLYP53396 AL732372.2-225ENST00000642124 456 ntBASIC3.85□□□□□ -1.79
ACLYP53396 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACLYP53396 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.85□□□□□ -1.79
ACLYP53396 GTF2H2B-203ENST00000508065 1432 ntBASIC3.85□□□□□ -1.79
ACLYP53396 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ACLYP53396 HSPA8P19-201ENST00000505359 1517 ntBASIC3.85□□□□□ -1.79
ACLYP53396 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.85□□□□□ -1.79
ACLYP53396 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.84□□□□□ -1.79
ACLYP53396 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ACLYP53396 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
ACLYP53396 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACLYP53396 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACLYP53396 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACLYP53396 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.84□□□□□ -1.79
ACLYP53396 AL356274.2-201ENST00000624379 3752 ntBASIC3.84□□□□□ -1.79
ACLYP53396 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
ACLYP53396 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ACLYP53396 RNA5SP502-201ENST00000362694 119 ntBASIC3.84□□□□□ -1.79
ACLYP53396 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.84□□□□□ -1.79
ACLYP53396 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.84□□□□□ -1.79
ACLYP53396 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.84□□□□□ -1.79
ACLYP53396 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.84□□□□□ -1.79
ACLYP53396 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.84□□□□□ -1.79
ACLYP53396 ELOCP11-201ENST00000436690 332 ntBASIC3.84□□□□□ -1.79
ACLYP53396 ELOCP16-201ENST00000444494 332 ntBASIC3.84□□□□□ -1.79
ACLYP53396 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ACLYP53396 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
ACLYP53396 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.84□□□□□ -1.79
ACLYP53396 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms