Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
MSH6P52701 MTND5P23-201ENST00000430812 1655 ntBASIC4.52□□□□□ -1.69
MSH6P52701 VN1R31P-201ENST00000417498 730 ntBASIC4.52□□□□□ -1.69
MSH6P52701 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.52□□□□□ -1.69
MSH6P52701 PTP4A1P1-201ENST00000420539 515 ntBASIC4.52□□□□□ -1.69
MSH6P52701 AL355994.1-201ENST00000424379 260 ntBASIC4.52□□□□□ -1.69
MSH6P52701 AC006989.1-201ENST00000427212 131 ntBASIC4.52□□□□□ -1.69
MSH6P52701 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.52□□□□□ -1.69
MSH6P52701 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.52□□□□□ -1.69
MSH6P52701 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.52□□□□□ -1.69
MSH6P52701 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.52□□□□□ -1.69
MSH6P52701 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.52□□□□□ -1.69
MSH6P52701 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.52□□□□□ -1.69
MSH6P52701 AC005229.2-201ENST00000456995 399 ntBASIC4.52□□□□□ -1.69
MSH6P52701 AC010307.1-201ENST00000467206 836 ntBASIC4.52□□□□□ -1.69
MSH6P52701 AC009812.2-201ENST00000517657 457 ntBASIC4.52□□□□□ -1.69
MSH6P52701 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MSH6P52701 UBL5P2-201ENST00000583788 219 ntBASIC4.52□□□□□ -1.69
MSH6P52701 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.52□□□□□ -1.69
MSH6P52701 NRBF2P5-201ENST00000603087 788 ntBASIC4.52□□□□□ -1.69
MSH6P52701 TUG1_1.1-201ENST00000610654 145 ntBASIC4.52□□□□□ -1.69
MSH6P52701 AC068722.2-201ENST00000618734 544 ntBASIC4.52□□□□□ -1.69
MSH6P52701 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.51□□□□□ -1.69
MSH6P52701 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MSH6P52701 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.51□□□□□ -1.69
MSH6P52701 AC245100.2-201ENST00000454544 1679 ntBASIC4.51□□□□□ -1.69
MSH6P52701 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
MSH6P52701 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MSH6P52701 SNORA68.2-201ENST00000391263 128 ntBASIC4.51□□□□□ -1.69
MSH6P52701 RAC1P3-201ENST00000416129 580 ntBASIC4.51□□□□□ -1.69
MSH6P52701 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.51□□□□□ -1.69
MSH6P52701 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
MSH6P52701 SKP1P1-201ENST00000438081 489 ntBASIC4.51□□□□□ -1.69
MSH6P52701 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.51□□□□□ -1.69
MSH6P52701 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.51□□□□□ -1.69
MSH6P52701 AP000926.3-201ENST00000497201 299 ntBASIC4.51□□□□□ -1.69
MSH6P52701 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.51□□□□□ -1.69
MSH6P52701 RNU6-237P-201ENST00000515985 71 ntBASIC4.51□□□□□ -1.69
MSH6P52701 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.51□□□□□ -1.69
MSH6P52701 AC026333.2-201ENST00000542164 106 ntBASIC4.51□□□□□ -1.69
MSH6P52701 AC087888.1-201ENST00000550884 1254 ntBASIC4.51□□□□□ -1.69
MSH6P52701 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.51□□□□□ -1.69
MSH6P52701 MIR4319-201ENST00000577285 85 ntBASIC4.51□□□□□ -1.69
MSH6P52701 AC010149.2-201ENST00000637608 315 ntBASIC4.51□□□□□ -1.69
MSH6P52701 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
MSH6P52701 AC139713.2-210ENST00000641741 992 ntBASIC4.51□□□□□ -1.69
MSH6P52701 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
MSH6P52701 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
MSH6P52701 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH6P52701 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
MSH6P52701 AC000403.1-201ENST00000613696 3585 ntBASIC4.5□□□□□ -1.69
MSH6P52701 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
MSH6P52701 RNU1-70P-201ENST00000362618 164 ntBASIC4.5□□□□□ -1.69
MSH6P52701 MIR708-201ENST00000390708 88 ntBASIC4.5□□□□□ -1.69
MSH6P52701 RPL23AP48-201ENST00000406913 488 ntBASIC4.5□□□□□ -1.69
MSH6P52701 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH6P52701 EEF1A1P41-201ENST00000414667 207 ntBASIC4.5□□□□□ -1.69
MSH6P52701 BTF3P9-201ENST00000418784 283 ntBASIC4.5□□□□□ -1.69
MSH6P52701 PPIAP17-201ENST00000438507 471 ntBASIC4.5□□□□□ -1.69
MSH6P52701 RPS4XP2-201ENST00000458402 793 ntBASIC4.5□□□□□ -1.69
MSH6P52701 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.5□□□□□ -1.69
MSH6P52701 RPL23AP73-201ENST00000492507 471 ntBASIC4.5□□□□□ -1.69
MSH6P52701 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.5□□□□□ -1.69
MSH6P52701 CCNHP1-201ENST00000513311 678 ntBASIC4.5□□□□□ -1.69
MSH6P52701 AC017037.2-201ENST00000513850 890 ntBASIC4.5□□□□□ -1.69
MSH6P52701 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH6P52701 MIR2682-201ENST00000580305 110 ntBASIC4.5□□□□□ -1.69
MSH6P52701 ELOCP29-201ENST00000588193 334 ntBASIC4.5□□□□□ -1.69
MSH6P52701 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH6P52701 AC022149.2-201ENST00000621061 203 ntBASIC4.5□□□□□ -1.69
MSH6P52701 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.5□□□□□ -1.69
MSH6P52701 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.5□□□□□ -1.69
MSH6P52701 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MSH6P52701 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
MSH6P52701 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH6P52701 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH6P52701 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
MSH6P52701 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
MSH6P52701 AC002075.2-201ENST00000425207 252 ntBASIC4.49□□□□□ -1.69
MSH6P52701 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH6P52701 AC239798.3-201ENST00000454459 408 ntBASIC4.49□□□□□ -1.69
MSH6P52701 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH6P52701 AC099560.2-201ENST00000457554 255 ntBASIC4.49□□□□□ -1.69
MSH6P52701 RPS29P26-201ENST00000477483 171 ntBASIC4.49□□□□□ -1.69
MSH6P52701 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH6P52701 RN7SKP116-201ENST00000516902 319 ntBASIC4.49□□□□□ -1.69
MSH6P52701 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.49□□□□□ -1.69
MSH6P52701 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.49□□□□□ -1.69
MSH6P52701 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.49□□□□□ -1.69
MSH6P52701 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.49□□□□□ -1.69
MSH6P52701 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
MSH6P52701 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
MSH6P52701 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
MSH6P52701 AC104446.1-201ENST00000613728 1321 ntBASIC4.48□□□□□ -1.69
MSH6P52701 AC062016.1-201ENST00000355719 319 ntBASIC4.48□□□□□ -1.69
MSH6P52701 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
MSH6P52701 SNORA71.1-201ENST00000364523 117 ntBASIC4.48□□□□□ -1.69
MSH6P52701 AL391417.1-201ENST00000404100 426 ntBASIC4.48□□□□□ -1.69
MSH6P52701 RN7SKP56-201ENST00000410513 331 ntBASIC4.48□□□□□ -1.69
MSH6P52701 RNA5SP184-201ENST00000411071 108 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms