Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.86□□□□□ -1.63
NEK3P51956 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.86□□□□□ -1.63
NEK3P51956 MIR6780A-201ENST00000615089 68 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AL357080.1-201ENST00000617394 239 ntBASIC4.86□□□□□ -1.63
NEK3P51956 AL022401.1-201ENST00000619498 108 ntBASIC4.86□□□□□ -1.63
NEK3P51956 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.86□□□□□ -1.63
NEK3P51956 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.86□□□□□ -1.63
NEK3P51956 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.86□□□□□ -1.63
NEK3P51956 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NEK3P51956 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NEK3P51956 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.85□□□□□ -1.63
NEK3P51956 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NEK3P51956 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NEK3P51956 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 RNU6-1200P-201ENST00000384162 107 ntBASIC4.85□□□□□ -1.63
NEK3P51956 RNU6-253P-201ENST00000384730 105 ntBASIC4.85□□□□□ -1.63
NEK3P51956 RNU6-821P-201ENST00000390995 107 ntBASIC4.85□□□□□ -1.63
NEK3P51956 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.85□□□□□ -1.63
NEK3P51956 RN7SKP216-201ENST00000411050 312 ntBASIC4.85□□□□□ -1.63
NEK3P51956 RPL26P29-201ENST00000415623 438 ntBASIC4.85□□□□□ -1.63
NEK3P51956 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.85□□□□□ -1.63
NEK3P51956 AC245028.1-201ENST00000423259 256 ntBASIC4.85□□□□□ -1.63
NEK3P51956 GLRXP1-201ENST00000423261 334 ntBASIC4.85□□□□□ -1.63
NEK3P51956 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.85□□□□□ -1.63
NEK3P51956 AC005154.2-201ENST00000438110 379 ntBASIC4.85□□□□□ -1.63
NEK3P51956 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.85□□□□□ -1.63
NEK3P51956 snoU109.4-201ENST00000458953 143 ntBASIC4.85□□□□□ -1.63
NEK3P51956 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.85□□□□□ -1.63
NEK3P51956 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.85□□□□□ -1.63
NEK3P51956 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.85□□□□□ -1.63
NEK3P51956 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.85□□□□□ -1.63
NEK3P51956 RNU6-678P-201ENST00000516832 109 ntBASIC4.85□□□□□ -1.63
NEK3P51956 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.85□□□□□ -1.63
NEK3P51956 AC022861.1-201ENST00000522981 663 ntBASIC4.85□□□□□ -1.63
NEK3P51956 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.85□□□□□ -1.63
NEK3P51956 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.85□□□□□ -1.63
NEK3P51956 AC133555.2-201ENST00000550213 292 ntBASIC4.85□□□□□ -1.63
NEK3P51956 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.85□□□□□ -1.63
NEK3P51956 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.85□□□□□ -1.63
NEK3P51956 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.85□□□□□ -1.63
NEK3P51956 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.85□□□□□ -1.63
NEK3P51956 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 RN7SL722P-201ENST00000617780 284 ntBASIC4.85□□□□□ -1.63
NEK3P51956 RN7SL565P-201ENST00000618246 284 ntBASIC4.85□□□□□ -1.63
NEK3P51956 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.85□□□□□ -1.63
NEK3P51956 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.85□□□□□ -1.63
NEK3P51956 AC018816.2-201ENST00000621460 353 ntBASIC4.85□□□□□ -1.63
NEK3P51956 AC012414.7-202ENST00000622705 1090 ntBASIC4.85□□□□□ -1.63
NEK3P51956 AC079228.1-201ENST00000624774 1049 ntBASIC4.85□□□□□ -1.63
NEK3P51956 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.85□□□□□ -1.63
NEK3P51956 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.85□□□□□ -1.63
NEK3P51956 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.85□□□□□ -1.63
NEK3P51956 AP000526.1-201ENST00000603308 1388 ntBASIC4.85□□□□□ -1.63
NEK3P51956 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEK3P51956 LINC01355-201ENST00000566551 5444 ntBASIC4.84□□□□□ -1.63
NEK3P51956 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEK3P51956 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEK3P51956 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.84□□□□□ -1.63
NEK3P51956 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.84□□□□□ -1.63
NEK3P51956 A2MP1-204ENST00000566278 4130 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.84□□□□□ -1.63
NEK3P51956 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NEK3P51956 OR5H2-201ENST00000355273 945 ntBASIC4.84□□□□□ -1.63
NEK3P51956 ARL4AP5-201ENST00000404372 599 ntBASIC4.84□□□□□ -1.63
NEK3P51956 RPS4XP9-201ENST00000405151 780 ntBASIC4.84□□□□□ -1.63
NEK3P51956 RPS16P5-201ENST00000406501 404 ntBASIC4.84□□□□□ -1.63
NEK3P51956 RSU1P3-201ENST00000412878 835 ntBASIC4.84□□□□□ -1.63
NEK3P51956 RPS15AP38-201ENST00000413110 372 ntBASIC4.84□□□□□ -1.63
NEK3P51956 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEK3P51956 TPMTP2-201ENST00000414372 726 ntBASIC4.84□□□□□ -1.63
NEK3P51956 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.84□□□□□ -1.63
NEK3P51956 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.84□□□□□ -1.63
NEK3P51956 AC083875.1-201ENST00000419509 405 ntBASIC4.84□□□□□ -1.63
NEK3P51956 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NEK3P51956 ZYG11AP1-201ENST00000430329 837 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.84□□□□□ -1.63
NEK3P51956 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 MTND1P26-201ENST00000440488 538 ntBASIC4.84□□□□□ -1.63
NEK3P51956 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 HSPE1P28-201ENST00000443139 211 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.84□□□□□ -1.63
NEK3P51956 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.84□□□□□ -1.63
NEK3P51956 AL645939.1-201ENST00000453429 797 ntBASIC4.84□□□□□ -1.63
NEK3P51956 RN7SL738P-201ENST00000470264 297 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AC008897.1-201ENST00000494006 347 ntBASIC4.84□□□□□ -1.63
NEK3P51956 RN7SL558P-201ENST00000497468 299 ntBASIC4.84□□□□□ -1.63
NEK3P51956 SCARNA22-201ENST00000503991 125 ntBASIC4.84□□□□□ -1.63
NEK3P51956 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms