Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RN7SKP247-201ENST00000411094 308 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLCN3P51790 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCN3P51790 AL356320.2-201ENST00000417263 507 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCN3P51790 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 RPS20P1-201ENST00000434853 354 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 NANOGP2-201ENST00000435391 727 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCN3P51790 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCN3P51790 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCN3P51790 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.44□□□□□ -1.7
CLCN3P51790 AC007537.2-201ENST00000472093 511 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 VPS26AP1-201ENST00000483197 979 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 AP000563.1-201ENST00000490865 758 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCN3P51790 RPL7L1P13-201ENST00000511702 739 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCN3P51790 RNU6-488P-201ENST00000515918 99 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 SNORD116-26-201ENST00000516006 96 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCN3P51790 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLCN3P51790 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.44□□□□□ -1.7
CLCN3P51790 AC091515.1-201ENST00000548110 679 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCN3P51790 AC084757.1-201ENST00000559987 490 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.44□□□□□ -1.7
CLCN3P51790 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCN3P51790 MIR3912-201ENST00000577566 105 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 MIR4512-201ENST00000583257 77 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCN3P51790 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.44□□□□□ -1.7
CLCN3P51790 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.44□□□□□ -1.7
CLCN3P51790 AC113368.1-201ENST00000603736 382 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLCN3P51790 AC021755.4-201ENST00000616620 456 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCN3P51790 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 AP005264.7-201ENST00000625003 745 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC4.44□□□□□ -1.7
CLCN3P51790 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CLCN3P51790 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
CLCN3P51790 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLCN3P51790 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CLCN3P51790 NEAT1-202ENST00000501122 22743 ntBASIC4.44□□□□□ -1.7
CLCN3P51790 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.44□□□□□ -1.7
CLCN3P51790 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN3P51790 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCN3P51790 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN3P51790 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN3P51790 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN3P51790 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCN3P51790 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCN3P51790 GSTA8P-201ENST00000404253 637 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCN3P51790 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCN3P51790 MTCO1P54-201ENST00000430139 712 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCN3P51790 Z95327.1-201ENST00000446082 482 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CLCN3P51790 RPL5P23-201ENST00000496040 868 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 STMN1P2-201ENST00000508435 439 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 AC048346.1-201ENST00000510247 144 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.43□□□□□ -1.7
CLCN3P51790 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCN3P51790 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCN3P51790 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN3P51790 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCN3P51790 AC074029.1-201ENST00000552531 1044 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CLCN3P51790 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.43□□□□□ -1.7
CLCN3P51790 AC009097.3-201ENST00000563557 1018 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCN3P51790 AC079171.1-201ENST00000568788 914 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 MTND3P13-201ENST00000574391 343 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 MIR5685-201ENST00000579080 79 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.43□□□□□ -1.7
CLCN3P51790 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.43□□□□□ -1.7
CLCN3P51790 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.43□□□□□ -1.7
CLCN3P51790 AC107952.2-201ENST00000606048 486 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCN3P51790 AC092954.1-201ENST00000609121 445 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCN3P51790 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN3P51790 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.43□□□□□ -1.7
CLCN3P51790 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLCN3P51790 AC105074.1-201ENST00000623380 3095 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 AC012321.1-201ENST00000561622 1588 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 SAGE2P-201ENST00000420011 2126 ntBASIC4.43□□□□□ -1.7
CLCN3P51790 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLCN3P51790 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN3P51790 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN3P51790 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CLCN3P51790 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN3P51790 RNU6-839P-201ENST00000363347 108 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 snoZ40.1-201ENST00000364540 72 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms