Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AL138799.3-201ENST00000438968 350 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 HMGB1P37-201ENST00000439613 609 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 UBE2V1P5-201ENST00000440070 405 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 MRPL35P4-201ENST00000453682 566 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM23P36406 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 RN7SL542P-201ENST00000467147 294 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM23P36406 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM23P36406 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.87□□□□□ -1.79
TRIM23P36406 AP003102.1-201ENST00000525638 661 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AC124293.1-201ENST00000530034 493 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.87□□□□□ -1.79
TRIM23P36406 SERPINE4P-201ENST00000554978 281 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AC126365.2-201ENST00000580630 379 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM23P36406 AC018926.3-201ENST00000618841 406 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AC233309.1-201ENST00000619522 751 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM23P36406 AC010872.1-201ENST00000624225 675 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AC106858.1-201ENST00000637497 429 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM23P36406 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM23P36406 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM23P36406 AL136520.1-201ENST00000600311 1322 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AC073055.1-201ENST00000456901 1621 ntBASIC3.87□□□□□ -1.79
TRIM23P36406 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM23P36406 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
TRIM23P36406 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM23P36406 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM23P36406 AF127577.6-201ENST00000623352 2191 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM23P36406 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM23P36406 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM23P36406 RNA5SP322-201ENST00000363617 119 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TRIM23P36406 MIR199A2-201ENST00000385289 110 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM23P36406 SNORA11C-201ENST00000408532 129 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 NUP35P2-201ENST00000416748 943 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM23P36406 RPL31P45-201ENST00000419532 356 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM23P36406 SNRPGP3-201ENST00000469405 227 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 AC112198.4-201ENST00000515450 351 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM23P36406 HMGB1P1-201ENST00000522557 636 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM23P36406 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM23P36406 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM23P36406 MIR3908-201ENST00000579798 126 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.86□□□□□ -1.79
TRIM23P36406 AC133794.1-201ENST00000602731 914 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 AC018645.2-201ENST00000609151 472 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 AC005156.1-201ENST00000613371 573 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 AF001550.2-201ENST00000636643 217 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 AC138649.5-201ENST00000637456 137 ntBASIC3.86□□□□□ -1.79
TRIM23P36406 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM23P36406 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM23P36406 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM23P36406 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM23P36406 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TRIM23P36406 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 AL161912.2-201ENST00000565707 3007 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TRIM23P36406 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 MIR525-201ENST00000384978 85 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 PRRC2CP1-201ENST00000404428 159 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 RNA5SP306-201ENST00000411087 107 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 AC239367.2-201ENST00000447309 705 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM23P36406 NANOGP10-201ENST00000453325 895 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM23P36406 HMGB3P30-201ENST00000457863 606 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 RPS4XP6-201ENST00000477670 797 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 AC073522.1-201ENST00000483312 377 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 UBE2CP3-201ENST00000502715 450 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM23P36406 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM23P36406 MTCO1P30-201ENST00000515244 580 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 RNU6-352P-201ENST00000516908 107 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM23P36406 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM23P36406 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM23P36406 AC104072.1-201ENST00000568817 668 ntBASIC3.85□□□□□ -1.79
TRIM23P36406 MIR1254-2-201ENST00000579553 63 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms