Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXD13P35453 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD13P35453 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD13P35453 RNA5SP443-201ENST00000363083 132 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 SNORA62-201ENST00000365493 153 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AL133412.1-201ENST00000380194 2992 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HOXD13P35453 EIF5P1-201ENST00000400019 1231 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXD13P35453 RAC1P8-201ENST00000427086 527 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 RPS27AP12-201ENST00000429552 465 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXD13P35453 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 EXOSC3P1-201ENST00000448649 500 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AC112492.1-201ENST00000449607 712 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AC079776.3-201ENST00000450665 370 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AL121877.1-201ENST00000453704 622 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 TRBV26-201ENST00000456572 344 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 RPL23AP2-201ENST00000471227 466 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 CEACAMP10-202ENST00000495431 496 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 UBE2V1P12-201ENST00000503954 474 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 RNA5SP154-201ENST00000516193 111 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXD13P35453 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXD13P35453 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXD13P35453 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXD13P35453 SNORD39.3-201ENST00000584451 71 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXD13P35453 AC104662.1-201ENST00000604448 511 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AL365400.2-201ENST00000605604 902 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AC069545.1-201ENST00000605671 358 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXD13P35453 MIR6868-201ENST00000611215 58 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 AC106754.1-201ENST00000562632 1513 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD13P35453 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HOXD13P35453 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD13P35453 PNPT1P2-201ENST00000456768 2050 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 AC090337.1-201ENST00000579651 2074 ntBASIC4.44□□□□□ -1.7
HOXD13P35453 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD13P35453 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HOXD13P35453 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD13P35453 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 AP005901.5-201ENST00000545779 1796 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD13P35453 OR4A15-201ENST00000314706 1035 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HOXD13P35453 SNORD65.1-201ENST00000390889 71 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 AL136133.1-201ENST00000413694 376 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 AC004552.1-201ENST00000419089 348 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 AC011742.1-201ENST00000431448 434 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 OR4C10P-201ENST00000434991 931 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD13P35453 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HOXD13P35453 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 AC010307.1-201ENST00000467206 836 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 RPS26P3-201ENST00000470205 348 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD13P35453 AC090543.2-201ENST00000483963 348 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 AC004057.1-201ENST00000485827 348 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 AC005798.1-201ENST00000513715 387 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 OR10V3P-201ENST00000525712 725 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD13P35453 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXD13P35453 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD13P35453 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD13P35453 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HOXD13P35453 BNIP3P40-201ENST00000596017 556 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 AL035411.2-201ENST00000604022 421 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 AC112230.1-201ENST00000604342 547 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD13P35453 AL138478.1-201ENST00000612252 832 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HOXD13P35453 AC121761.2-201ENST00000617300 689 ntBASIC4.43□□□□□ -1.7
HOXD13P35453 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXD13P35453 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HOXD13P35453 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD13P35453 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms