Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 HMGB1P5-202ENST00000451497 985 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 AP000563.1-201ENST00000490865 758 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 MTCO2P32-201ENST00000514865 403 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 RNU6-579P-201ENST00000516879 102 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AP003730.1-201ENST00000524605 285 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 OR7E13P-201ENST00000526052 910 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AC023161.2-201ENST00000551218 780 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 MIR4506-201ENST00000584693 77 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 MIMT1-201ENST00000597105 1050 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 RNU4-89P-201ENST00000607443 133 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AC110792.4-201ENST00000609843 298 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AC016911.1-201ENST00000613297 452 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.08□□□□□ -1.92
HLA-DMAP28067 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMAP28067 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMAP28067 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DMAP28067 ELL2P4-201ENST00000446870 1376 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 PABPC1P7-201ENST00000413177 1513 ntBASIC3.08□□□□□ -1.92
HLA-DMAP28067 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMAP28067 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMAP28067 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMAP28067 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMAP28067 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMAP28067 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 U3.39-201ENST00000408569 239 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 TRIAP1P1-201ENST00000427062 225 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 AL645931.1-201ENST00000439737 410 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 ELOCP13-201ENST00000443934 329 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 SETD6P1-201ENST00000444575 317 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 SSXP4-201ENST00000451349 245 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 CYCSP53-201ENST00000455540 265 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 AC093278.1-201ENST00000494700 600 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 AC104115.2-201ENST00000523026 687 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMAP28067 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 DUXAP6-201ENST00000553858 601 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 AC090751.1-201ENST00000566966 267 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 IGHV3-29-201ENST00000604817 344 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMAP28067 HSPA8P19-201ENST00000505359 1517 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 RLIMP1-201ENST00000339626 1680 ntBASIC3.07□□□□□ -1.92
HLA-DMAP28067 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.07□□□□□ -1.92
HLA-DMAP28067 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HLA-DMAP28067 AC004925.1-201ENST00000624256 2706 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMAP28067 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMAP28067 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HLA-DMAP28067 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMAP28067 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMAP28067 SOD2P1-201ENST00000396543 562 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DMAP28067 ZNF602P-201ENST00000405929 924 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 RN7SKP123-201ENST00000410732 291 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 OR8G2P-201ENST00000412796 908 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 MTND4P22-201ENST00000413116 1169 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 AC005517.2-201ENST00000424673 553 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 RPL23AP82-202ENST00000427528 469 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DMAP28067 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMAP28067 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.06□□□□□ -1.92
HLA-DMAP28067 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.06□□□□□ -1.92
HLA-DMAP28067 CENPBD1P1-201ENST00000464061 469 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.06□□□□□ -1.92
HLA-DMAP28067 AC022034.3-201ENST00000471393 478 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 AC007688.1-201ENST00000475592 759 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMAP28067 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 AC108064.1-201ENST00000513791 460 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 RNA5SP385-201ENST00000515947 110 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 SNORA70.19-201ENST00000516717 90 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 RNU6-1073P-201ENST00000517182 106 ntBASIC3.06□□□□□ -1.92
HLA-DMAP28067 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DMAP28067 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms