Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.98□□□□□ -1.61
POLR2AP24928 AC012417.1-201ENST00000582307 1039 ntBASIC4.98□□□□□ -1.61
POLR2AP24928 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.98□□□□□ -1.61
POLR2AP24928 AC010487.1-201ENST00000594408 1172 ntBASIC4.98□□□□□ -1.61
POLR2AP24928 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.98□□□□□ -1.61
POLR2AP24928 AC112220.3-201ENST00000605502 502 ntBASIC4.98□□□□□ -1.61
POLR2AP24928 NDUFA8P1-201ENST00000605525 367 ntBASIC4.98□□□□□ -1.61
POLR2AP24928 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.98□□□□□ -1.61
POLR2AP24928 AC138749.5-201ENST00000611461 208 ntBASIC4.98□□□□□ -1.61
POLR2AP24928 AC025048.6-202ENST00000627667 438 ntBASIC4.98□□□□□ -1.61
POLR2AP24928 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
POLR2AP24928 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
POLR2AP24928 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
POLR2AP24928 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.97□□□□□ -1.61
POLR2AP24928 CASC19-284ENST00000642142 1868 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR2AP24928 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
POLR2AP24928 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
POLR2AP24928 ZNF603P-201ENST00000405613 487 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 RN7SKP167-201ENST00000411047 285 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 RN7SKP142-201ENST00000411236 328 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 AC098592.1-201ENST00000419352 333 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR2AP24928 AC002542.1-201ENST00000440683 193 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.97□□□□□ -1.61
POLR2AP24928 AC023512.1-201ENST00000444513 499 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR2AP24928 ST13P20-201ENST00000447996 1065 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 RPL38P1-201ENST00000460914 211 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.97□□□□□ -1.61
POLR2AP24928 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR2AP24928 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.97□□□□□ -1.61
POLR2AP24928 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.97□□□□□ -1.61
POLR2AP24928 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 AC079171.1-201ENST00000568788 914 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.97□□□□□ -1.61
POLR2AP24928 MIR3944-201ENST00000581277 108 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 AC091805.2-201ENST00000603848 235 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 AC108747.1-201ENST00000609508 535 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 AL139418.1-201ENST00000613613 177 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 AL356321.1-201ENST00000621360 228 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 FP236240.3-201ENST00000623061 327 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 MTND4P29-201ENST00000503122 1372 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
POLR2AP24928 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
POLR2AP24928 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 AC093909.5-201ENST00000621839 1799 ntBASIC4.97□□□□□ -1.61
POLR2AP24928 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
POLR2AP24928 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
POLR2AP24928 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.96□□□□□ -1.61
POLR2AP24928 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
POLR2AP24928 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
POLR2AP24928 AL672167.1-206ENST00000356293 943 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 OR1L1-202ENST00000373686 1083 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 MIR142-201ENST00000384835 87 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
POLR2AP24928 MTCO3P31-201ENST00000405526 789 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 AL512430.2-201ENST00000406786 339 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 RPS7P9-201ENST00000414704 586 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 PTP4A1P1-201ENST00000420539 515 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.96□□□□□ -1.61
POLR2AP24928 AC104651.1-201ENST00000427559 735 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.96□□□□□ -1.61
POLR2AP24928 CEACAMP1-201ENST00000434624 1035 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 RAB11AP1-201ENST00000442978 646 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.96□□□□□ -1.61
POLR2AP24928 RPL5P13-201ENST00000462840 709 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 AC072039.1-201ENST00000477611 581 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.96□□□□□ -1.61
POLR2AP24928 AC026782.2-201ENST00000510845 636 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 RNU6-314P-201ENST00000516574 104 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.96□□□□□ -1.61
POLR2AP24928 AC118273.2-201ENST00000532092 465 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.96□□□□□ -1.61
POLR2AP24928 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.96□□□□□ -1.61
POLR2AP24928 AC090312.1-201ENST00000580637 348 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 VN1R92P-201ENST00000598511 928 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
POLR2AP24928 AC091304.9-201ENST00000612091 226 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
POLR2AP24928 AC009878.1-201ENST00000621819 340 ntBASIC4.96□□□□□ -1.61
POLR2AP24928 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.96□□□□□ -1.61
POLR2AP24928 AC017007.4-201ENST00000503353 1352 ntBASIC4.96□□□□□ -1.62
POLR2AP24928 A2MP1-204ENST00000566278 4130 ntBASIC4.96□□□□□ -1.62
POLR2AP24928 VPS35P1-201ENST00000563400 1518 ntBASIC4.96□□□□□ -1.62
POLR2AP24928 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
POLR2AP24928 AC140134.1-201ENST00000511830 3544 ntBASIC4.96□□□□□ -1.62
POLR2AP24928 SNORA5.1-201ENST00000384275 131 ntBASIC4.96□□□□□ -1.62
POLR2AP24928 AL139247.1-201ENST00000422768 325 ntBASIC4.96□□□□□ -1.62
POLR2AP24928 MTND5P20-201ENST00000448677 143 ntBASIC4.96□□□□□ -1.62
POLR2AP24928 ELOCP23-201ENST00000452014 332 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms