Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.21□□□□□ -1.42
LMNB1P20700 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.21□□□□□ -1.42
LMNB1P20700 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.21□□□□□ -1.42
LMNB1P20700 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LMNB1P20700 CENPUP2-201ENST00000555897 1186 ntBASIC6.21□□□□□ -1.42
LMNB1P20700 MIR4307-201ENST00000582802 84 ntBASIC6.21□□□□□ -1.42
LMNB1P20700 DUXAP4-201ENST00000603046 613 ntBASIC6.21□□□□□ -1.42
LMNB1P20700 AL592295.2-201ENST00000612578 206 ntBASIC6.21□□□□□ -1.42
LMNB1P20700 AC243773.3-201ENST00000613270 256 ntBASIC6.21□□□□□ -1.42
LMNB1P20700 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LMNB1P20700 AC015712.7-201ENST00000615211 635 ntBASIC6.21□□□□□ -1.42
LMNB1P20700 AL359880.1-201ENST00000621879 266 ntBASIC6.21□□□□□ -1.42
LMNB1P20700 AC005618.4-201ENST00000625053 554 ntBASIC6.21□□□□□ -1.42
LMNB1P20700 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.21□□□□□ -1.42
LMNB1P20700 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.21□□□□□ -1.42
LMNB1P20700 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
LMNB1P20700 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
LMNB1P20700 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.21□□□□□ -1.42
LMNB1P20700 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
LMNB1P20700 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LMNB1P20700 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
LMNB1P20700 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
LMNB1P20700 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LMNB1P20700 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LMNB1P20700 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
LMNB1P20700 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 AC099654.2-201ENST00000433031 1980 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LMNB1P20700 VPS35P1-201ENST00000563400 1518 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 SCARNA15-201ENST00000607520 4325 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
LMNB1P20700 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 AL354685.2-201ENST00000448218 1447 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AC008033.1-201ENST00000216407 1162 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 Y_RNA.296-201ENST00000364930 108 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 RNU6-533P-201ENST00000384144 107 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 RNU6-225P-201ENST00000384613 103 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
LMNB1P20700 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 RNU2-41P-201ENST00000410991 178 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AC073264.1-201ENST00000411508 416 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AF186996.5-201ENST00000418098 904 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AL592293.2-201ENST00000422292 996 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.2□□□□□ -1.42
LMNB1P20700 BX890604.2-201ENST00000427883 474 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 NPM1P34-201ENST00000428821 893 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 RPL23AP1-201ENST00000428990 471 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.2□□□□□ -1.42
LMNB1P20700 AC093414.1-201ENST00000434712 514 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AL161722.2-201ENST00000434731 981 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 RPS4XP4-201ENST00000443195 763 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 MTCO1P27-201ENST00000448269 226 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.2□□□□□ -1.42
LMNB1P20700 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.2□□□□□ -1.42
LMNB1P20700 OR52A4P-201ENST00000472867 958 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 ACTR3P3-201ENST00000480448 893 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.2□□□□□ -1.42
LMNB1P20700 AC010350.1-201ENST00000504908 231 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 ARL4AP2-201ENST00000507378 601 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 OR5AQ1P-201ENST00000527596 927 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AP000790.1-201ENST00000528891 737 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AL109766.1-201ENST00000555080 552 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AC020910.3-201ENST00000603701 874 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AC112187.2-201ENST00000604345 283 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AC103710.1-201ENST00000610003 901 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AC244107.2-201ENST00000611773 76 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC6.2□□□□□ -1.42
LMNB1P20700 AC063943.3-201ENST00000615562 356 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AC002553.4-201ENST00000616896 331 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 AL139089.1-201ENST00000620372 975 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 CASC19-204ENST00000641001 2055 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.2□□□□□ -1.42
LMNB1P20700 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.2□□□□□ -1.42
LMNB1P20700 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.2□□□□□ -1.42
LMNB1P20700 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.2□□□□□ -1.42
LMNB1P20700 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
LMNB1P20700 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
LMNB1P20700 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
LMNB1P20700 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.19□□□□□ -1.42
LMNB1P20700 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
LMNB1P20700 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
LMNB1P20700 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.19□□□□□ -1.42
LMNB1P20700 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.19□□□□□ -1.42
LMNB1P20700 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms