Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 AC068205.4-201ENST00000637880 804 ntBASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 RPL36AP21-202ENST00000639134 430 ntBASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 AC093909.5-201ENST00000621839 1799 ntBASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 AC074029.4-201ENST00000624796 1859 ntBASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 DDX18P3-201ENST00000404856 2007 ntBASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.28□□□□□ -1.56
H2AFB1P0C5Y9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AL122126.1-201ENST00000546905 1318 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 Y_RNA.170-201ENST00000363746 110 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 U3.11-201ENST00000364476 212 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 Y_RNA.269-201ENST00000364685 89 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 SNORD115-7-201ENST00000365306 82 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AMELY-202ENST00000383036 621 ntTSL 5 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 SNORA41-201ENST00000384675 132 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AL583834.1-201ENST00000406943 343 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AL023284.3-201ENST00000407767 334 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 GNG5P5-201ENST00000420444 220 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC239367.3-201ENST00000428996 814 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 FDPSP8-201ENST00000438304 1089 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 LINC01399-202ENST00000458450 244 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 SCARNA18-201ENST00000459004 134 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC022730.2-201ENST00000465359 452 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AL161747.1-201ENST00000480068 358 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC026979.1-201ENST00000492525 396 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 RPA2P3-201ENST00000533268 770 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC073916.1-201ENST00000545095 130 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 NDUFA3P4-201ENST00000560814 250 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC005899.2-201ENST00000584353 90 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 MIR5692C1-201ENST00000585309 91 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC008687.2-201ENST00000597865 520 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC011500.1-201ENST00000601963 469 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC004241.2-201ENST00000614562 444 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 SHQ1P1-201ENST00000437111 1544 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC074141.1-201ENST00000588129 2995 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 AC020633.1-201ENST00000468439 2247 ntBASIC5.27□□□□□ -1.57
H2AFB1P0C5Y9 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 AC105235.1-201ENST00000623208 1816 ntBASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 AC093849.1-201ENST00000563631 2209 ntBASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 Y_RNA.105-201ENST00000363182 111 ntBASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 RNA5SP260-201ENST00000363849 111 ntBASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 RN7SKP250-201ENST00000363924 321 ntBASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 RNU6-1207P-201ENST00000384343 107 ntBASIC5.26□□□□□ -1.57
H2AFB1P0C5Y9 RNA5SP187-201ENST00000384400 119 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms