Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL355379.1-201ENST00000405542 640 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TPM1P09493 RNF19BPX-201ENST00000426224 625 ntBASIC3.79□□□□□ -1.8
TPM1P09493 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM1P09493 RPL21P112-201ENST00000434403 463 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AL662791.1-201ENST00000441992 928 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.79□□□□□ -1.8
TPM1P09493 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.79□□□□□ -1.8
TPM1P09493 BX276092.4-201ENST00000452056 248 ntBASIC3.79□□□□□ -1.8
TPM1P09493 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TPM1P09493 AC092754.2-201ENST00000463506 460 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.79□□□□□ -1.8
TPM1P09493 AC093267.1-201ENST00000489176 961 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.79□□□□□ -1.8
TPM1P09493 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM1P09493 RNU6-491P-201ENST00000516099 110 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.79□□□□□ -1.8
TPM1P09493 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM1P09493 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.79□□□□□ -1.8
TPM1P09493 AC074029.1-201ENST00000552531 1044 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AC245128.3-201ENST00000594721 748 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AC090912.3-201ENST00000609775 533 ntBASIC3.79□□□□□ -1.8
TPM1P09493 AC112200.1-201ENST00000625015 234 ntBASIC3.79□□□□□ -1.8
TPM1P09493 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.79□□□□□ -1.8
TPM1P09493 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM1P09493 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TPM1P09493 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TPM1P09493 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TPM1P09493 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.78□□□□□ -1.8
TPM1P09493 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TPM1P09493 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.78□□□□□ -1.8
TPM1P09493 FRG1CP-201ENST00000358464 769 ntBASIC3.78□□□□□ -1.8
TPM1P09493 MIR372-201ENST00000362225 67 ntBASIC3.78□□□□□ -1.8
TPM1P09493 RPL7P60-201ENST00000397636 735 ntBASIC3.78□□□□□ -1.8
TPM1P09493 RNU2-65P-201ENST00000410162 185 ntBASIC3.78□□□□□ -1.8
TPM1P09493 RN7SKP156-201ENST00000410308 342 ntBASIC3.78□□□□□ -1.8
TPM1P09493 RNU6-564P-201ENST00000410983 104 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AL356968.1-201ENST00000416622 474 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AC012498.1-201ENST00000424037 437 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.78□□□□□ -1.8
TPM1P09493 PSMA2P3-201ENST00000429685 675 ntBASIC3.78□□□□□ -1.8
TPM1P09493 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.78□□□□□ -1.8
TPM1P09493 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.78□□□□□ -1.8
TPM1P09493 AL590399.6-201ENST00000446396 307 ntBASIC3.78□□□□□ -1.8
TPM1P09493 HMGB1P5-202ENST00000451497 985 ntBASIC3.78□□□□□ -1.8
TPM1P09493 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
TPM1P09493 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.78□□□□□ -1.8
TPM1P09493 AC017007.3-201ENST00000479865 435 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.78□□□□□ -1.8
TPM1P09493 FABP5P6-201ENST00000510588 409 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AC093853.1-201ENST00000515689 483 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AC245166.1-201ENST00000521012 253 ntBASIC3.78□□□□□ -1.8
TPM1P09493 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.78□□□□□ -1.8
TPM1P09493 AC010735.1-201ENST00000567305 1026 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.78□□□□□ -1.8
TPM1P09493 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TPM1P09493 MIR3690-201ENST00000580266 75 ntBASIC3.78□□□□□ -1.8
TPM1P09493 MIR4286-201ENST00000580651 93 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AC090616.5-202ENST00000582111 297 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AC053481.4-201ENST00000583164 216 ntBASIC3.78□□□□□ -1.8
TPM1P09493 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TPM1P09493 MIR6875-201ENST00000617506 72 ntBASIC3.78□□□□□ -1.8
TPM1P09493 AL391597.1-201ENST00000618707 694 ntBASIC3.78□□□□□ -1.8
TPM1P09493 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TPM1P09493 PLCE1P1-201ENST00000622094 305 ntBASIC3.78□□□□□ -1.8
TPM1P09493 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TPM1P09493 AC032011.1-201ENST00000611703 1549 ntBASIC3.78□□□□□ -1.8
TPM1P09493 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TPM1P09493 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.78□□□□□ -1.8
TPM1P09493 AC093908.1-201ENST00000623125 8092 ntBASIC3.78□□□□□ -1.81
TPM1P09493 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
TPM1P09493 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
TPM1P09493 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TPM1P09493 MIR421-201ENST00000365696 85 ntBASIC3.77□□□□□ -1.81
TPM1P09493 RNU2-6P-201ENST00000411404 190 ntBASIC3.77□□□□□ -1.81
TPM1P09493 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.77□□□□□ -1.81
TPM1P09493 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM1P09493 RPS4XP13-201ENST00000483219 789 ntBASIC3.77□□□□□ -1.81
TPM1P09493 HMGN1P11-201ENST00000508668 303 ntBASIC3.77□□□□□ -1.81
TPM1P09493 MTCO1P35-201ENST00000515270 228 ntBASIC3.77□□□□□ -1.81
TPM1P09493 RN7SKP122-201ENST00000515923 296 ntBASIC3.77□□□□□ -1.81
TPM1P09493 RN7SKP244-201ENST00000516513 307 ntBASIC3.77□□□□□ -1.81
TPM1P09493 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM1P09493 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.77□□□□□ -1.81
TPM1P09493 IGKV2D-19-201ENST00000523346 262 ntBASIC3.77□□□□□ -1.81
TPM1P09493 SYF2P1-201ENST00000550658 413 ntBASIC3.77□□□□□ -1.81
TPM1P09493 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.77□□□□□ -1.81
TPM1P09493 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.77□□□□□ -1.81
TPM1P09493 AC005156.1-201ENST00000613371 573 ntBASIC3.77□□□□□ -1.81
TPM1P09493 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
TPM1P09493 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TPM1P09493 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
TPM1P09493 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.77□□□□□ -1.81
TPM1P09493 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TPM1P09493 MTCO1P8-201ENST00000416914 1523 ntBASIC3.76□□□□□ -1.81
TPM1P09493 RNU6-600P-201ENST00000362524 99 ntBASIC3.76□□□□□ -1.81
TPM1P09493 RNA5SP283-201ENST00000365604 119 ntBASIC3.76□□□□□ -1.81
TPM1P09493 RNU6-1293P-201ENST00000384077 107 ntBASIC3.76□□□□□ -1.81
TPM1P09493 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TPM1P09493 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms