Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TXNL1P1-201ENST00000429528 554 ntBASIC4.54□□□□□ -1.68
MMP3P08254 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.54□□□□□ -1.68
MMP3P08254 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP3P08254 GTF2IP7-202ENST00000436677 309 ntBASIC4.54□□□□□ -1.68
MMP3P08254 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MMP3P08254 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
MMP3P08254 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MMP3P08254 AL500522.2-201ENST00000448562 343 ntBASIC4.54□□□□□ -1.68
MMP3P08254 RPS11P1-201ENST00000451072 473 ntBASIC4.54□□□□□ -1.68
MMP3P08254 AC015724.1-201ENST00000478577 156 ntBASIC4.54□□□□□ -1.68
MMP3P08254 GAPDHP39-201ENST00000481866 979 ntBASIC4.54□□□□□ -1.68
MMP3P08254 RN7SL809P-201ENST00000482040 297 ntBASIC4.54□□□□□ -1.68
MMP3P08254 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.54□□□□□ -1.68
MMP3P08254 AC093755.1-201ENST00000512950 1023 ntBASIC4.54□□□□□ -1.68
MMP3P08254 MRPS33P3-201ENST00000513456 322 ntBASIC4.54□□□□□ -1.68
MMP3P08254 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP3P08254 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP3P08254 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.54□□□□□ -1.68
MMP3P08254 HIGD1AP17-201ENST00000554576 276 ntBASIC4.54□□□□□ -1.68
MMP3P08254 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP3P08254 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP3P08254 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.54□□□□□ -1.68
MMP3P08254 AL358072.1-201ENST00000604156 575 ntBASIC4.54□□□□□ -1.68
MMP3P08254 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP3P08254 AC018926.3-201ENST00000618841 406 ntBASIC4.54□□□□□ -1.68
MMP3P08254 CR392039.5-201ENST00000623201 510 ntBASIC4.54□□□□□ -1.68
MMP3P08254 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP3P08254 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.54□□□□□ -1.68
MMP3P08254 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP3P08254 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MMP3P08254 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP3P08254 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MMP3P08254 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
MMP3P08254 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.54□□□□□ -1.68
MMP3P08254 AC093535.2-201ENST00000624769 2326 ntBASIC4.54□□□□□ -1.68
MMP3P08254 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 Z82217.1-201ENST00000625157 8149 ntBASIC4.53□□□□□ -1.68
MMP3P08254 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
MMP3P08254 RNA5SP124-201ENST00000362739 110 ntBASIC4.53□□□□□ -1.68
MMP3P08254 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 MIR200C-201ENST00000384980 68 ntBASIC4.53□□□□□ -1.68
MMP3P08254 MIR16-1-201ENST00000385271 89 ntBASIC4.53□□□□□ -1.68
MMP3P08254 RNA5SP372-201ENST00000390836 115 ntBASIC4.53□□□□□ -1.68
MMP3P08254 SNORD65.1-201ENST00000390889 71 ntBASIC4.53□□□□□ -1.68
MMP3P08254 SNORA11.1-201ENST00000408133 129 ntBASIC4.53□□□□□ -1.68
MMP3P08254 RNU2-6P-201ENST00000411404 190 ntBASIC4.53□□□□□ -1.68
MMP3P08254 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP3P08254 USP9YP26-201ENST00000421008 661 ntBASIC4.53□□□□□ -1.68
MMP3P08254 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 AC073069.1-201ENST00000428657 441 ntBASIC4.53□□□□□ -1.68
MMP3P08254 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP3P08254 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP3P08254 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP3P08254 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 AC092393.1-201ENST00000439625 742 ntBASIC4.53□□□□□ -1.68
MMP3P08254 AC093155.1-201ENST00000440164 826 ntBASIC4.53□□□□□ -1.68
MMP3P08254 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.53□□□□□ -1.68
MMP3P08254 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP3P08254 AL133547.1-201ENST00000448546 220 ntBASIC4.53□□□□□ -1.68
MMP3P08254 RPL23AP71-201ENST00000470966 469 ntBASIC4.53□□□□□ -1.68
MMP3P08254 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.53□□□□□ -1.68
MMP3P08254 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP3P08254 RNU6-1129P-201ENST00000515964 104 ntBASIC4.53□□□□□ -1.68
MMP3P08254 RN7SKP283-201ENST00000517197 270 ntBASIC4.53□□□□□ -1.68
MMP3P08254 AF186190.1-201ENST00000517470 480 ntBASIC4.53□□□□□ -1.68
MMP3P08254 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP3P08254 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MMP3P08254 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP3P08254 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP3P08254 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.53□□□□□ -1.68
MMP3P08254 AC025627.2-201ENST00000576220 160 ntBASIC4.53□□□□□ -1.68
MMP3P08254 MIR4666A-201ENST00000580160 79 ntBASIC4.53□□□□□ -1.68
MMP3P08254 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.53□□□□□ -1.68
MMP3P08254 AC115085.1-201ENST00000588924 229 ntBASIC4.53□□□□□ -1.68
MMP3P08254 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.53□□□□□ -1.68
MMP3P08254 AC023813.4-201ENST00000607580 580 ntBASIC4.53□□□□□ -1.68
MMP3P08254 AL360219.1-201ENST00000610230 366 ntBASIC4.53□□□□□ -1.68
MMP3P08254 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP3P08254 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP3P08254 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP3P08254 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.53□□□□□ -1.68
MMP3P08254 AC012442.3-202ENST00000636742 206 ntBASIC4.53□□□□□ -1.68
MMP3P08254 AP003399.1-201ENST00000637534 361 ntBASIC4.53□□□□□ -1.68
MMP3P08254 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.53□□□□□ -1.68
MMP3P08254 SGO1P1-201ENST00000603525 1447 ntBASIC4.53□□□□□ -1.68
MMP3P08254 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms