Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 NFIB-202ENST00000380924 840 ntTSL 5 BASIC1.87□□□□□ -2.11
APOBP04114 MIR764-201ENST00000390811 85 ntBASIC1.87□□□□□ -2.11
APOBP04114 FCF1P8-201ENST00000510322 597 ntBASIC1.87□□□□□ -2.11
APOBP04114 EEF1A1P37-201ENST00000522748 715 ntBASIC1.87□□□□□ -2.11
APOBP04114 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC1.87□□□□□ -2.11
APOBP04114 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC1.87□□□□□ -2.11
APOBP04114 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 snoU13.23-201ENST00000458863 104 ntBASIC1.87□□□□□ -2.11
APOBP04114 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.87□□□□□ -2.11
APOBP04114 AC099489.2-201ENST00000574976 260 ntBASIC1.87□□□□□ -2.11
APOBP04114 AL356274.1-201ENST00000617064 410 ntBASIC1.87□□□□□ -2.11
APOBP04114 AL596275.2-204ENST00000641628 552 ntBASIC1.87□□□□□ -2.11
APOBP04114 AL596275.2-206ENST00000641957 626 ntBASIC1.87□□□□□ -2.11
APOBP04114 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
APOBP04114 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC1.87□□□□□ -2.11
APOBP04114 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.87□□□□□ -2.11
APOBP04114 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC1.87□□□□□ -2.11
APOBP04114 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC1.87□□□□□ -2.11
APOBP04114 ACTG1P13-201ENST00000486987 1043 ntBASIC1.87□□□□□ -2.11
APOBP04114 AC008565.1-201ENST00000509046 885 ntBASIC1.87□□□□□ -2.11
APOBP04114 RN7SKP244-201ENST00000516513 307 ntBASIC1.87□□□□□ -2.11
APOBP04114 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
APOBP04114 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC1.87□□□□□ -2.11
APOBP04114 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.87□□□□□ -2.11
APOBP04114 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
APOBP04114 HSPA8P1-201ENST00000425843 1833 ntBASIC1.87□□□□□ -2.11
APOBP04114 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 Y_RNA.226-201ENST00000364337 114 ntBASIC1.86□□□□□ -2.11
APOBP04114 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
APOBP04114 AL079342.1-201ENST00000401460 267 ntBASIC1.86□□□□□ -2.11
APOBP04114 RPS4XP7-201ENST00000406274 780 ntBASIC1.86□□□□□ -2.11
APOBP04114 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.86□□□□□ -2.11
APOBP04114 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC1.86□□□□□ -2.11
APOBP04114 AL442163.2-201ENST00000553912 710 ntBASIC1.86□□□□□ -2.11
APOBP04114 uc_338.32-201ENST00000615087 172 ntBASIC1.86□□□□□ -2.11
APOBP04114 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC1.86□□□□□ -2.11
APOBP04114 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
APOBP04114 USP12PY-201ENST00000427677 1064 ntBASIC1.86□□□□□ -2.11
APOBP04114 AC112492.1-201ENST00000449607 712 ntBASIC1.86□□□□□ -2.11
APOBP04114 AC010307.1-201ENST00000467206 836 ntBASIC1.86□□□□□ -2.11
APOBP04114 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC1.86□□□□□ -2.11
APOBP04114 AC107934.2-201ENST00000518653 310 ntBASIC1.86□□□□□ -2.11
APOBP04114 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC1.86□□□□□ -2.11
APOBP04114 AC023389.2-201ENST00000580031 955 ntBASIC1.86□□□□□ -2.11
APOBP04114 AL359535.1-201ENST00000612100 1087 ntBASIC1.86□□□□□ -2.11
APOBP04114 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.86□□□□□ -2.11
APOBP04114 AC010300.1-201ENST00000600671 5134 ntBASIC1.86□□□□□ -2.11
APOBP04114 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.86□□□□□ -2.11
APOBP04114 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC1.86□□□□□ -2.11
APOBP04114 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 AC139713.2-215ENST00000641428 5037 ntBASIC1.86□□□□□ -2.11
APOBP04114 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
APOBP04114 RNA5SP184-201ENST00000411071 108 ntBASIC1.86□□□□□ -2.11
APOBP04114 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.86□□□□□ -2.11
APOBP04114 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
APOBP04114 IL7R-208ENST00000511982 612 ntTSL 2 BASIC1.86□□□□□ -2.11
APOBP04114 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC1.86□□□□□ -2.11
APOBP04114 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
APOBP04114 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC1.86□□□□□ -2.11
APOBP04114 AC098826.3-201ENST00000603823 466 ntBASIC1.86□□□□□ -2.11
APOBP04114 AL157817.1-201ENST00000614264 790 ntBASIC1.86□□□□□ -2.11
APOBP04114 MIR6817-201ENST00000615588 66 ntBASIC1.86□□□□□ -2.11
APOBP04114 AL158062.1-201ENST00000619632 745 ntBASIC1.86□□□□□ -2.11
APOBP04114 SNORD39.4-201ENST00000620099 78 ntBASIC1.86□□□□□ -2.11
APOBP04114 RALGAPA1P1-201ENST00000443361 6232 ntBASIC1.86□□□□□ -2.11
APOBP04114 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 NEAT1-202ENST00000501122 22743 ntBASIC1.86□□□□□ -2.11
APOBP04114 KPNA2P2-201ENST00000419546 1489 ntBASIC1.86□□□□□ -2.11
APOBP04114 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
APOBP04114 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 RNA5SP21-201ENST00000410917 96 ntBASIC1.86□□□□□ -2.11
APOBP04114 AL031736.2-201ENST00000426573 787 ntBASIC1.86□□□□□ -2.11
APOBP04114 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC1.86□□□□□ -2.11
APOBP04114 RPS27AP9-201ENST00000477681 438 ntBASIC1.86□□□□□ -2.11
APOBP04114 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.86□□□□□ -2.11
APOBP04114 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.86□□□□□ -2.11
APOBP04114 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC1.86□□□□□ -2.11
APOBP04114 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
APOBP04114 SNORD15B-201ENST00000384714 146 ntBASIC1.85□□□□□ -2.11
APOBP04114 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.85□□□□□ -2.11
APOBP04114 AC083906.5-201ENST00000503722 328 ntBASIC1.85□□□□□ -2.11
APOBP04114 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC1.85□□□□□ -2.11
APOBP04114 DNAJC19P3-201ENST00000594491 331 ntBASIC1.85□□□□□ -2.11
APOBP04114 AC015871.2-201ENST00000603605 948 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms