Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEMA3DO95025 RNA5SP51-201ENST00000364750 119 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 RNA5SP235-201ENST00000365411 114 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 RNU6-452P-201ENST00000384406 107 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SEMA3DO95025 RN7SKP159-201ENST00000410657 292 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 AC105402.1-201ENST00000413336 545 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.41□□□□□ -1.86
SEMA3DO95025 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AL590623.1-201ENST00000427864 105 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.41□□□□□ -1.86
SEMA3DO95025 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.41□□□□□ -1.86
SEMA3DO95025 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SEMA3DO95025 ACTG1P13-201ENST00000486987 1043 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 SETP14-201ENST00000497538 873 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.41□□□□□ -1.86
SEMA3DO95025 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.41□□□□□ -1.86
SEMA3DO95025 PHBP14-201ENST00000512887 367 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.41□□□□□ -1.86
SEMA3DO95025 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AL049870.4-201ENST00000555741 486 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SEMA3DO95025 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.41□□□□□ -1.86
SEMA3DO95025 AC242628.1-201ENST00000606810 391 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 CR589904.2-201ENST00000612533 440 ntBASIC3.41□□□□□ -1.86
SEMA3DO95025 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.41□□□□□ -1.86
SEMA3DO95025 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
SEMA3DO95025 MTND5P3-201ENST00000438536 1800 ntBASIC3.4□□□□□ -1.86
SEMA3DO95025 AC068647.1-201ENST00000489539 2265 ntBASIC3.4□□□□□ -1.86
SEMA3DO95025 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SEMA3DO95025 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
SEMA3DO95025 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SEMA3DO95025 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.4□□□□□ -1.87
SEMA3DO95025 MIR1193-201ENST00000408109 78 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.4□□□□□ -1.87
SEMA3DO95025 AC004022.2-201ENST00000413824 193 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 XKRYP4-201ENST00000414395 483 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 LIPT1P1-201ENST00000415870 1186 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 AC008065.1-201ENST00000428525 348 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 TRIM60P13-201ENST00000432350 1283 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 RRM2P4-201ENST00000441721 562 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.4□□□□□ -1.87
SEMA3DO95025 XKRYP5-201ENST00000449659 483 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.4□□□□□ -1.87
SEMA3DO95025 AP002884.2-201ENST00000471647 395 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 AC084357.1-201ENST00000473404 255 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.4□□□□□ -1.87
SEMA3DO95025 RPL30P11-201ENST00000495304 339 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.4□□□□□ -1.87
SEMA3DO95025 FTH1P24-201ENST00000503502 462 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEMA3DO95025 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEMA3DO95025 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.4□□□□□ -1.87
SEMA3DO95025 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.4□□□□□ -1.87
SEMA3DO95025 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.4□□□□□ -1.87
SEMA3DO95025 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.4□□□□□ -1.87
SEMA3DO95025 AC005972.3-201ENST00000606304 481 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 AC018816.2-201ENST00000621460 353 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.4□□□□□ -1.87
SEMA3DO95025 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.4□□□□□ -1.87
SEMA3DO95025 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.4□□□□□ -1.87
SEMA3DO95025 AC007656.2-201ENST00000624902 4547 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.4□□□□□ -1.87
SEMA3DO95025 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SEMA3DO95025 AL079305.1-201ENST00000623159 3008 ntBASIC3.4□□□□□ -1.87
SEMA3DO95025 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.4□□□□□ -1.87
SEMA3DO95025 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEMA3DO95025 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.39□□□□□ -1.87
SEMA3DO95025 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.39□□□□□ -1.87
SEMA3DO95025 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SEMA3DO95025 SNORD9-201ENST00000362566 104 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 RNU6-317P-201ENST00000384031 107 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 AL445189.1-201ENST00000405722 338 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 RN7SKP53-201ENST00000411337 315 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.39□□□□□ -1.87
SEMA3DO95025 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AL031736.2-201ENST00000426573 787 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 AL031663.1-201ENST00000437445 219 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 NPM1P49-201ENST00000448027 714 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.39□□□□□ -1.87
SEMA3DO95025 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
SEMA3DO95025 AC092754.2-201ENST00000463506 460 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 RPL6P9-201ENST00000466502 859 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 RPL31P13-201ENST00000484151 370 ntBASIC3.39□□□□□ -1.87
SEMA3DO95025 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 394 ms