Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
GRIN3BO60391 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AL390316.1-201ENST00000406279 553 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC6.11□□□□□ -1.43
GRIN3BO60391 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC114755.2-201ENST00000413520 361 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AL121878.1-201ENST00000418638 859 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 UQCRBP1-201ENST00000421129 336 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC233728.2-201ENST00000425348 757 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 OR2B7P-201ENST00000429302 934 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 MTCO3P21-201ENST00000430791 643 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.11□□□□□ -1.43
GRIN3BO60391 Z99127.3-201ENST00000448158 395 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 RPL39P6-201ENST00000448289 150 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC013267.1-201ENST00000458227 267 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC097493.1-201ENST00000463958 372 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 RPL7L1P8-201ENST00000469911 741 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC128716.1-201ENST00000475129 166 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC6.11□□□□□ -1.43
GRIN3BO60391 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.11□□□□□ -1.43
GRIN3BO60391 KCTD9P2-201ENST00000512203 1013 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC108064.1-201ENST00000513791 460 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
GRIN3BO60391 SNORA31.9-201ENST00000516429 84 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 RNU6-430P-201ENST00000517078 107 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC022878.1-201ENST00000530684 149 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.11□□□□□ -1.43
GRIN3BO60391 MIR3944-201ENST00000581277 108 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.11□□□□□ -1.43
GRIN3BO60391 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.11□□□□□ -1.43
GRIN3BO60391 AL161729.4-201ENST00000604650 476 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC244107.2-201ENST00000611773 76 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AL158209.2-201ENST00000619266 216 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC136475.10-201ENST00000620253 385 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 RNA5SP196-201ENST00000625967 102 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 AC006206.1-201ENST00000544842 3387 ntBASIC6.11□□□□□ -1.43
GRIN3BO60391 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.11□□□□□ -1.43
GRIN3BO60391 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
GRIN3BO60391 AC004076.2-201ENST00000620532 3323 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.1□□□□□ -1.43
GRIN3BO60391 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.1□□□□□ -1.43
GRIN3BO60391 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 GDI2P1-201ENST00000429312 1336 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 ZNF652P1-201ENST00000442420 1309 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 RNA5SP372-201ENST00000390836 115 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 VN1R8P-201ENST00000407739 893 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 RNU2-65P-201ENST00000410162 185 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 RN7SKP202-201ENST00000410439 330 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 RN7SKP17-201ENST00000411242 351 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 NUP35P2-201ENST00000416748 943 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC6.1□□□□□ -1.43
GRIN3BO60391 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC6.1□□□□□ -1.43
GRIN3BO60391 TIMM9P3-201ENST00000428659 274 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 MTND3P23-201ENST00000431980 347 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AL353748.1-201ENST00000440753 474 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AL662791.1-201ENST00000441992 928 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 SNRPEP8-201ENST00000442866 260 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 PHBP16-201ENST00000446318 950 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AL035551.1-201ENST00000446931 348 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.1□□□□□ -1.43
GRIN3BO60391 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.1□□□□□ -1.43
GRIN3BO60391 RN7SL189P-201ENST00000468631 289 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 RPL7P19-201ENST00000469948 618 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.1□□□□□ -1.43
GRIN3BO60391 SCARNA22-201ENST00000503991 125 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.1□□□□□ -1.43
GRIN3BO60391 AC108078.1-201ENST00000508073 725 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 PTGES3P3-201ENST00000511479 482 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AC015795.1-201ENST00000513669 327 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.1□□□□□ -1.43
GRIN3BO60391 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
GRIN3BO60391 AP005639.2-201ENST00000527592 928 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.1□□□□□ -1.43
GRIN3BO60391 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.1□□□□□ -1.43
GRIN3BO60391 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.1□□□□□ -1.43
GRIN3BO60391 AC084783.1-201ENST00000565846 910 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.1□□□□□ -1.43
GRIN3BO60391 MIR3913-1-201ENST00000577744 102 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AC005034.5-201ENST00000604219 466 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 AC090948.2-201ENST00000607363 564 ntBASIC6.1□□□□□ -1.43
GRIN3BO60391 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.1□□□□□ -1.43
GRIN3BO60391 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.1□□□□□ -1.43
GRIN3BO60391 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.1□□□□□ -1.43
GRIN3BO60391 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms