Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MIR7153-201ENST00000637758 57 ntBASIC3.47□□□□□ -1.85
TRIM49D1C9J1S8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49D1C9J1S8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM49D1C9J1S8 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49D1C9J1S8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM49D1C9J1S8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM49D1C9J1S8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.46□□□□□ -1.85
TRIM49D1C9J1S8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
TRIM49D1C9J1S8 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.46□□□□□ -1.85
TRIM49D1C9J1S8 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
TRIM49D1C9J1S8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 SKINT1L-201ENST00000401057 817 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 RPL31P52-201ENST00000407532 367 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 RN7SKP177-201ENST00000410567 355 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 RNU6-628P-201ENST00000410675 107 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AL158050.1-201ENST00000416077 457 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 RPL7P53-201ENST00000421245 739 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AL354692.1-201ENST00000423044 315 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 VN1R42P-201ENST00000424651 344 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 RPL21P71-201ENST00000465598 459 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 SUMO1P1-201ENST00000497904 306 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 CAB39P1-201ENST00000502277 460 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 MTCO2P9-201ENST00000503214 694 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AC004024.1-201ENST00000549244 247 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 MIR4286-201ENST00000580651 93 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AC012254.4-201ENST00000588843 273 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AL049844.2-201ENST00000604280 628 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 BNIP3P31-201ENST00000604515 566 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 AC123768.4-201ENST00000616244 701 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 MFSD8-233ENST00000641482 4860 ntBASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM49D1C9J1S8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC032011.1-201ENST00000611703 1549 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 RN7SKP280-201ENST00000364196 304 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 RNA5SP51-201ENST00000364750 119 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC007066.1-201ENST00000392902 381 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 ATF1P1-201ENST00000406040 927 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 RN7SKP222-201ENST00000410651 315 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 RNA5SP107-201ENST00000411358 122 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC069282.1-201ENST00000411911 526 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AL356968.1-201ENST00000416622 474 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 TRGV6-201ENST00000417928 299 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 RPS15AP6-201ENST00000420703 385 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 RPS29P7-201ENST00000439662 171 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AL158053.1-201ENST00000441503 453 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AL136097.1-201ENST00000456945 913 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 RPL23AP67-201ENST00000465341 474 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AP000926.1-201ENST00000479573 241 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC133963.2-201ENST00000513686 578 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 MTCO3P27-201ENST00000514397 196 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC104115.2-201ENST00000523026 687 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 CBX3P2-202ENST00000583365 535 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC011492.1-201ENST00000600023 315 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AL049634.3-201ENST00000604968 457 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AP000240.1-201ENST00000609910 452 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AC006249.1-201ENST00000621223 471 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AL590396.2-201ENST00000636511 1041 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 MTCO1P14-201ENST00000441695 1559 ntBASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM49D1C9J1S8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms