Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 IFNWP4-201ENST00000453148 294 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC092324.1-201ENST00000468671 324 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC058823.1-201ENST00000485315 474 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC016065.2-201ENST00000514530 444 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 FABP5P5-201ENST00000515537 406 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 HIGD1AP5-201ENST00000529959 259 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AP001180.3-201ENST00000582221 145 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC087683.1-201ENST00000591187 441 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC103792.1-201ENST00000603591 919 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC108738.1-201ENST00000603703 237 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC015540.1-201ENST00000615828 501 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 uc_338.7-201ENST00000621834 124 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 AC006378.2-201ENST00000623178 2476 ntBASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5□□□□□ -1.61
PCDHGA3Q9Y5H0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 IQCB2P-201ENST00000401788 1633 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 RNU5E-5P-201ENST00000365379 116 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 RPL21P67-201ENST00000402896 478 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 RPL12P9-201ENST00000412942 488 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC069213.2-201ENST00000420238 366 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 USP9YP9-201ENST00000429406 715 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 LSM1P1-201ENST00000438629 273 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 PTMAP3-201ENST00000447474 330 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 PDSS1P2-201ENST00000449397 678 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 RN7SL860P-201ENST00000473738 223 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 RN7SKP277-201ENST00000516895 283 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 RN7SKP260-201ENST00000516907 149 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC013828.2-201ENST00000532487 235 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 CENPUP2-201ENST00000555897 1186 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC067852.4-201ENST00000590314 478 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AP000769.2-201ENST00000602344 396 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC078795.2-201ENST00000602835 1252 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AL008729.2-201ENST00000606393 473 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC103710.4-201ENST00000609301 899 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC026585.1-201ENST00000619582 524 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC004009.2-201ENST00000623016 728 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 MTND4P5-201ENST00000435821 1374 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.99□□□□□ -1.61
PCDHGA3Q9Y5H0 AC012618.3-205ENST00000637896 1496 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms