Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AL389895.1-201ENST00000554127 252 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 HMGN2P47-201ENST00000559378 272 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 MIR1269B-201ENST00000580405 75 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 MIR3128-201ENST00000581957 66 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 MIR98-201ENST00000606724 119 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 AL021918.2-201ENST00000613415 194 ntBASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.44□□□□□ -1.22
PDZRN3Q9UPQ7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 GNG5P1-201ENST00000255500 204 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 U3.10-201ENST00000364459 214 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.288-201ENST00000364854 92 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 Y_RNA.301-201ENST00000364990 103 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 GAPDHP42-201ENST00000406848 981 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 NMD3P2-201ENST00000421815 761 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AL445928.1-201ENST00000435545 222 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 PRELID3BP1-201ENST00000457142 540 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC011225.1-201ENST00000457751 369 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 MIR2053-201ENST00000459295 91 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC007547.1-201ENST00000462177 490 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 OR2AO1P-201ENST00000476497 403 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC022215.1-201ENST00000481770 362 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 EIF4EP3-201ENST00000498782 656 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC025465.3-201ENST00000510570 311 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 MTND1P19-201ENST00000511780 315 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-615P-201ENST00000516065 106 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AP005435.4-201ENST00000529514 284 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 ATP5F1P7-201ENST00000567330 760 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 MIR6128-201ENST00000615528 109 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 MIR7155-201ENST00000615925 56 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC024023.1-201ENST00000624530 922 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 AC000095.2-202ENST00000637415 154 ntBASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC7.43□□□□□ -1.22
PDZRN3Q9UPQ7 CDC27P3-201ENST00000635418 1910 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-1115P-201ENST00000362490 106 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AL136116.1-201ENST00000403591 381 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 CFL1P1-202ENST00000432948 411 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 RPS17P8-201ENST00000434525 335 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 RPL23AP16-201ENST00000441715 421 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 RPS3AP46-201ENST00000448352 682 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 RNU6-1132P-201ENST00000459214 107 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 RN7SL184P-201ENST00000488308 297 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 HIGD1AP14-201ENST00000507617 282 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 SUB1P1-201ENST00000524415 382 ntBASIC7.42□□□□□ -1.22
PDZRN3Q9UPQ7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms