Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 NUP35P2-201ENST00000416748 943 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AL513174.1-201ENST00000423182 629 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RPS27AP12-201ENST00000429552 465 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 MTCO1P57-201ENST00000432182 261 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RPL29P29-201ENST00000448725 423 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AC146507.1-201ENST00000468335 354 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 TRBV8-2-201ENST00000475637 270 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 GAPDHP36-201ENST00000480688 918 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AC067852.3-201ENST00000589177 561 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 ZYXP1-201ENST00000617638 118 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 MIR4278-201ENST00000636094 69 ntBASIC3.29□□□□□ -1.88
VAPAQ9P0L0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VAPAQ9P0L0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 SNORD9-201ENST00000362566 104 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 RNU6-1293P-201ENST00000384077 107 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 MIR142-201ENST00000384835 87 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AC007066.1-201ENST00000392902 381 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 MIR1303-201ENST00000408625 86 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 RPL7P29-201ENST00000437151 728 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 CYCSP43-201ENST00000438233 310 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 RPL23AP33-201ENST00000442301 452 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 NPM1P49-201ENST00000448027 714 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AC010468.1-201ENST00000461022 817 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 RN7SL442P-201ENST00000473804 320 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 RPL23AP44-201ENST00000482216 473 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AC078918.1-201ENST00000498515 228 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AC005921.1-201ENST00000510589 286 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 COX6B1P6-201ENST00000522347 255 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 MTND2P26-201ENST00000528255 1029 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 OR5D17P-201ENST00000531492 978 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 OR6C73P-201ENST00000546432 358 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AGGF1P6-201ENST00000569213 976 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 MIR4286-201ENST00000580651 93 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 AC083809.1-201ENST00000615051 472 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 RNU6-156P-201ENST00000621869 107 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 MIR4496-201ENST00000635896 61 ntBASIC3.28□□□□□ -1.88
VAPAQ9P0L0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.28□□□□□ -1.88
VAPAQ9P0L0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
VAPAQ9P0L0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 RAD1P1-201ENST00000231383 813 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 U8.11-201ENST00000384699 133 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 U8.12-201ENST00000384701 133 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 SKINT1L-201ENST00000401057 817 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 RNU6-628P-201ENST00000410675 107 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC093578.1-201ENST00000415219 368 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 RPS15AP6-201ENST00000420703 385 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 PSMA2P3-201ENST00000429685 675 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 RPL37P1-201ENST00000432310 284 ntBASIC3.27□□□□□ -1.89
VAPAQ9P0L0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
VAPAQ9P0L0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms