Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC104073.1-201ENST00000451988 151 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 RPL7AP28-201ENST00000464513 571 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 RN7SL604P-201ENST00000492589 296 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC113347.3-201ENST00000509113 148 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC023141.12-201ENST00000512399 199 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AP003385.6-201ENST00000531603 374 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 MIR5684-201ENST00000585074 65 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AL035411.2-201ENST00000604022 421 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC021749.1-201ENST00000604322 607 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AL121652.1-201ENST00000608851 448 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 AC009237.15-201ENST00000610252 501 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.57□□□□□ -1.68
BLOC1S4Q9NUP1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 ZNF962P-201ENST00000443465 3140 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 RPL32P3-201ENST00000359025 275 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 RNVU1-3-201ENST00000364313 161 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 RNA5SP513-201ENST00000364648 118 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 RNA5SP167-201ENST00000365461 116 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 RHOT1P2-201ENST00000366423 333 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 MIR93-201ENST00000385024 80 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 TPT1P2-201ENST00000413105 503 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 ELOCP18-201ENST00000434209 337 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 ELOCP8-201ENST00000439309 332 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 ELOCP15-201ENST00000442090 332 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AL031313.1-201ENST00000448435 256 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC079776.3-201ENST00000450665 370 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AP000873.1-201ENST00000463987 400 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC084024.2-201ENST00000503480 791 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 OR51K1P-201ENST00000510214 950 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 RN7SKP122-201ENST00000515923 296 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 MIR4509-3-201ENST00000578671 94 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC012417.1-201ENST00000582307 1039 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 MIR4509-2-201ENST00000583920 94 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AL159169.3-201ENST00000608871 561 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC104763.3-201ENST00000613765 618 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 MIR4509-1-201ENST00000618224 94 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC010608.2-201ENST00000624830 470 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 MIR6830-201ENST00000636015 70 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 AC130650.2-201ENST00000618736 2403 ntBASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
BLOC1S4Q9NUP1 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
BLOC1S4Q9NUP1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
BLOC1S4Q9NUP1 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.55□□□□□ -1.68
BLOC1S4Q9NUP1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
BLOC1S4Q9NUP1 ZNF37BP-203ENST00000452306 1352 ntBASIC4.55□□□□□ -1.68
BLOC1S4Q9NUP1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
BLOC1S4Q9NUP1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BLOC1S4Q9NUP1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
BLOC1S4Q9NUP1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms