Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.04□□□□□ -1.76
HPS4Q9NQG7 AGGF1P8-201ENST00000562979 1000 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 ATP5F1P7-201ENST00000567330 760 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 AC007599.1-201ENST00000568688 1174 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 AP000919.1-202ENST00000581139 1264 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 AC084824.5-201ENST00000612009 413 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 AC005344.1-201ENST00000613391 459 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 AP003400.6-201ENST00000624698 740 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 AC009093.8-201ENST00000641769 292 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HPS4Q9NQG7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HPS4Q9NQG7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HPS4Q9NQG7 AC024560.2-201ENST00000507981 1497 ntBASIC4.04□□□□□ -1.76
HPS4Q9NQG7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 RNU6-761P-201ENST00000384148 107 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 SNORA11.1-201ENST00000408133 129 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 BX664727.1-201ENST00000416024 466 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 SYF2P2-201ENST00000417620 583 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 MTCO1P54-201ENST00000430139 712 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 HIGD1AP4-201ENST00000430194 280 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 RPL7P28-201ENST00000437739 740 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC105402.2-201ENST00000438503 358 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 RPL32P14-201ENST00000463196 378 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC146507.1-201ENST00000468335 354 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 TRAV31-201ENST00000502780 342 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 SNORA70.14-201ENST00000516205 110 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AP003717.3-201ENST00000544832 1180 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC022968.1-201ENST00000567372 442 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC015911.5-201ENST00000587076 451 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC026741.1-201ENST00000605892 482 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AC020978.9-201ENST00000624380 1141 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AL034408.1-202ENST00000636088 415 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AF001550.2-201ENST00000636643 217 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 AP004289.2-201ENST00000444413 1457 ntBASIC4.03□□□□□ -1.76
HPS4Q9NQG7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HPS4Q9NQG7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 RNA5SP391-201ENST00000363456 119 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 Y_RNA.333-201ENST00000365274 102 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 RPL21P17-201ENST00000397467 475 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 RN7SKP56-201ENST00000410513 331 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 MRPL35P4-201ENST00000453682 566 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AC104689.1-201ENST00000473356 768 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 RNU6-334P-201ENST00000517072 102 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AC090312.2-201ENST00000582687 378 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 EIF1P6-201ENST00000600054 334 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 AC027287.1-201ENST00000553115 1453 ntBASIC4.02□□□□□ -1.77
HPS4Q9NQG7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HPS4Q9NQG7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HPS4Q9NQG7 AL592494.2-201ENST00000425455 1548 ntBASIC4.01□□□□□ -1.77
HPS4Q9NQG7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.01□□□□□ -1.77
HPS4Q9NQG7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HPS4Q9NQG7 AC090337.1-201ENST00000579651 2074 ntBASIC4.01□□□□□ -1.77
HPS4Q9NQG7 NMD3P1-201ENST00000439704 1488 ntBASIC4.01□□□□□ -1.77
HPS4Q9NQG7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HPS4Q9NQG7 RNU6-1339P-201ENST00000363574 91 ntBASIC4.01□□□□□ -1.77
HPS4Q9NQG7 MIR7-3-201ENST00000384898 110 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms